RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 DEFB125Q8N687 156 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FCGR3BO75015 233 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 UCNP55089 124 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 OR1A2Q9Y585 309 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CDX4O14627 284 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SPINT2O43291 252 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 HMGN2P05204 90 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PSG2P11465 335 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ATXN8Q156A1 80 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 OR10D3Q8NH80 312 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 HSD17B8Q92506 261 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FSTP19883 344 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM108Q6UXF1 575 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 DRAM1Q8N682 238 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 OR4A5Q8NH83 315 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FGF14Q92915 247 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SLC35A4Q96G79 324 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 DERL3Q96Q80 235 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 NEUROG3Q9Y4Z2 214 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PLNP26678 52 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 LAMTOR4Q0VGL1 99 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 MFSD12Q6NUT3 480 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 OR10G6Q8NH81 332 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 VOPP1Q96AW1 172 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CISD1Q9NZ45 108 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1B0GVT2 93 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FCMRO60667 390 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TNFSF9P41273 254 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 RPS18P62269 152 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF766Q5HY98 468 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CYP2G1PQ6ZSU1 146 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SLCO1C1Q9NYB5 712 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 UFC1Q9Y3C8 167 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 KIR2DS3K7RE56 304 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SP1P08047 785 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 KIR2DS3Q14952 304 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 OR1Q1Q15612 314 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PDPNQ86YL7 162 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PIKFYVEQ9Y2I7 2098 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CPMP14384 443 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM42Q69YG0 159 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CRYGNQ8WXF5 182 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PRSS16Q9NQE7 514 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 HS3ST3B1Q9Y662 390 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SAA2-SAA4A0A096LPE2 208 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 LOC107986453A0A1B0GWG9 222 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 C1orf226A1L170 272 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 IGHEP01854 428 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 VTNP04004 478 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 UNQ9370/PRO34162Q6UXP9 181 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PPDPFLQ8WWR9 84 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PP6455Q8WZ26 134 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SYNGR1O43759 233 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PPP1CAP62136 330 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TECRQ9NZ01 308 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TNFRSF18Q9Y5U5 241 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SRD5A1P18405 259 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM215Q68D42 235 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FAM72BQ86X60 149 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FGF13Q92913 245 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PARP12Q9H0J9 701 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 FER1L5A0AVI2 2057 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 DUX1O43812 170 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CRYGBP07316 175 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TNFRSF1AP19438 455 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF157P51786 506 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 UTF1Q5T230 341 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SCD5Q86SK9 330 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 GPR32P1Q8NGA4 272 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 DUX5Q96PT3 197 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CHAC1Q9BUX1 264 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 GGTLC1Q9BX51 225 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 M0QXV9 152 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CEACAM5P06731 702 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 UBE2ZQ9H832 354 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF462Q96JM2 2506 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SOCS6O14544 535 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 NEURL1O76050 574 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 C8orf88P0DMB2 117 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 LGALS3P17931 250 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 LAIR2Q6ISS4 152 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ANKRD29Q8N6D5 301 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CES1P1Q9UKY3 287 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PAGE4O60829 102 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 CDKN1CP49918 316 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM255AQ5JRV8 349 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 STAC2Q6ZMT1 411 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PELI2Q9HAT8 420 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 MRPL3P09001 348 aaKnown RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SELEP16581 610 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TRA2AQ13595 282 aaKnown RBP eCLIP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ONECUT1Q9UBC0 465 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SF3B6Q9Y3B4 125 aaKnown RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1B0GWA3 101 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 GRM6O15303 877 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 HPXP02790 462 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 F13BP05160 661 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TEX38Q6PEX7 206 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 LINC00596Q86U02 117 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms