RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 M0R036 132 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 SH2D1BO14796 132 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 IGLV2-14P01704 120 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 SNRNP70P08621 437 aaKnown RBP12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 IAPPP10997 89 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 CEACAM6P40199 344 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 RAB5CP51148 216 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 FOXF2Q12947 444 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 Q6ZT83 130 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 SCRT1Q9BWW7 348 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 IFT22Q9H7X7 185 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 KPTNQ9Y664 436 aa12.58□□□□□ -0.39
VIPAS39-202ENST00000343765 CLEC18AA5D8T8 446 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 RAC2P15153 192 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 PAX9P55771 341 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 CCL20P78556 96 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 Q8IYB0 196 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 CLEC18CQ8NCF0 446 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 CD300LFQ8TDQ1 290 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 RARRES2Q99969 163 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 RNF115Q9Y4L5 304 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 PSPNO60542 156 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 HAND1O96004 215 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 H2AFB1P0C5Y9 115 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 DAOP14920 347 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 MDH2P40926 338 aaKnown RBP12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 KIR2DL2P43627 348 aaPredicted RBP12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 AWAT1Q58HT5 328 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 PRAMEF6Q5VXH4 476 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 C2CD4CQ8TF44 421 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 IL22RA2Q969J5 263 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 CLCC1Q96S66 551 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
VIPAS39-202ENST00000343765 IQCF6A8MYZ5 107 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 MLNRO43193 412 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 FABP6P51161 128 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 CEBPGP53567 150 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 OR2B11Q5JQS5 317 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 MSL2Q9HCI7 577 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 RELNP78509 3460 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 CADP27708 2225 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 UMAD1C9J7I0 102 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 IGHG3P01860 377 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 CRYBA1P05813 215 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 SLC25A24Q6NUK1 477 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 INO80CQ6PI98 192 aaPredicted RBP12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 MOB1BQ7L9L4 216 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 ABHD14BQ96IU4 210 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 PRELID3BQ9Y3B1 194 aa12.57□□□□□ -0.4
VIPAS39-202ENST00000343765 PIP4P1Q86T03 277 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 OR1L1Q8NH94 360 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 ASCL3Q9NQ33 180 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 J3QW42 95 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 TIMM8AO60220 97 aaPredicted RBP12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 IGKV1-5P01602 117 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 OR3A1P47881 315 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 AESQ08117 197 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 ZNF146Q15072 292 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 STX12Q86Y82 276 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 ZNF295-AS1Q8N0V1 137 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 TPRX1Q8N7U7 411 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 PBDC1Q9BVG4 233 aa12.56□□□□□ -0.4
VIPAS39-202ENST00000343765 A0A1B0GU03 582 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 TXNL1O43396 289 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 BAXQ07812 192 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 DRAM1Q8N682 238 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 ATP5SQ99766 215 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 SMCO4Q9NRQ5 59 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 CD82P27701 267 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 AKR1D1P51857 326 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 RPL23AP62750 156 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 HAGHQ16775 308 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 TREM2Q9NZC2 230 aa12.55□□□□□ -0.4
VIPAS39-202ENST00000343765 NPIPB11E5RHQ5 1161 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 KALRNO60229 2985 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 METTL15P1P0C7V9 234 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 CECR9P0C854 216 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 CBR1P16152 277 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 AVPI1Q5T686 147 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 THNSL2Q86YJ6 484 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 OR52L2PQ8NGH6 319 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 TRAV17A0A0B4J275 112 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms