RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 SGCZQ96LD1 299 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 TMEM204Q9BSN7 226 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 CD300LBA8K4G0 201 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 B4GALT1P15291 398 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 CDKN1AP38936 164 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 NABP1Q96AH0 204 aa12.71□□□□□ -0.37
CLCN1-201ENST00000343257 FAM103A1Q9BTL3 118 aaKnown RBP12.71□□□□□ -0.37
CLCN1-201ENST00000343257 RBM7Q9Y580 266 aaKnown RBP12.71□□□□□ -0.37
CLCN1-201ENST00000343257 FER1L5A0AVI2 2057 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 GNRH1P01148 92 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 BCL3P20749 454 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 UCP1P25874 307 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 BLKP51451 505 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 MRPS11P82912 194 aaKnown RBP12.71□□□□□ -0.38
CLCN1-201ENST00000343257 ACOT6Q3I5F7 207 aaPredicted RBP12.71□□□□□ -0.38
CLCN1-201ENST00000343257 ZNF573Q86YE8 665 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 P2RX4Q99571 388 aa12.71□□□□□ -0.38
CLCN1-201ENST00000343257 FRYLO94915 3013 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 IGKV1-6A0A0C4DH72 117 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 HS3ST1O14792 307 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 KCNMB1Q16558 191 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 HIST3H3Q16695 136 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 Q6ZVH6 145 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 TGIF2LYQ8IUE0 185 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 C11orf42Q8N5U0 333 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 RASL10BQ96S79 203 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 ERRFI1Q9UJM3 462 aaPredicted RBP12.7□□□□□ -0.38
CLCN1-201ENST00000343257 FRYQ5TBA9 3013 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 AQP7P3A6NL99 342 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 SYNGR2O43760 224 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 BRS3P32247 399 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 PDLIM4P50479 330 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 TMEM211Q6ICI0 200 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 ACSM6Q6P461 480 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
CLCN1-201ENST00000343257 MRPS18CQ9Y3D5 142 aaKnown RBP12.7□□□□□ -0.38
CLCN1-201ENST00000343257 KIR2DL5BA0A0G2JN68 375 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 KIR2DL5BA0A0G2JPC4 375 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 CTSSP25774 331 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 KIR2DL5AQ8N109 375 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 RDH5Q92781 318 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 ALKBH3Q96Q83 286 aaPredicted RBP12.69□□□□□ -0.38
CLCN1-201ENST00000343257 DERL1Q9BUN8 251 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 OR2J1Q9GZK6 312 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 TRAV34A0A0B4J273 112 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 MPLP40238 635 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 RAET1LQ5VY80 246 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 ZNF488Q96MN9 340 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 DNAJC4Q9NNZ3 241 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 TP53I11O14683 189 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 IGHV3-9P01782 118 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 ZNF32P17041 273 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 IGFBP7Q16270 282 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 SPINK9Q5DT21 86 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 ZCCHC14Q8WYQ9 949 aaKnown RBP12.69□□□□□ -0.38
CLCN1-201ENST00000343257 HSPB9Q9BQS6 159 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 FGF21Q9NSA1 209 aa12.69□□□□□ -0.38
CLCN1-201ENST00000343257 A0A1B0GX78 115 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 CLDN1O95832 211 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 F2RP25116 425 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 ADMP35318 185 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 PTGDSP41222 190 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 FASLGP48023 281 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 HIST1H3AP68431 136 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 CFHR1Q03591 330 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 KIAA0895LQ68EN5 471 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 Q6ZWC4 215 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 FGFBP3Q8TAT2 258 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 HLA-CQ95604 372 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 WDR61Q9GZS3 305 aaKnown RBP12.68□□□□□ -0.38
CLCN1-201ENST00000343257 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 URB1O60287 2271 aaKnown RBP12.68□□□□□ -0.38
CLCN1-201ENST00000343257 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
CLCN1-201ENST00000343257 CCL2P13500 99 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 CD38P28907 300 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 THBS3P49746 956 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 RPP30P78346 268 aaKnown RBP12.68□□□□□ -0.38
CLCN1-201ENST00000343257 DAZAP2Q15038 168 aaPredicted RBP12.68□□□□□ -0.38
CLCN1-201ENST00000343257 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 Q6ZS52 159 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 OR2M3Q8NG83 312 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 TAF15Q92804 592 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLCN1-201ENST00000343257 TUBG2Q9NRH3 451 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 GPR27Q9NS67 375 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 ATG2AQ2TAZ0 1938 aa12.68□□□□□ -0.38
CLCN1-201ENST00000343257 KIAA1324LA8MWY0 1029 aaPredicted RBP12.67□□□□□ -0.38
CLCN1-201ENST00000343257 SLC38A11Q08AI6 406 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 ANKRD37Q7Z713 158 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 CISD2Q8N5K1 135 aaKnown RBP12.67□□□□□ -0.38
CLCN1-201ENST00000343257 ADPRHL1Q8NDY3 354 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 VPS13AQ96RL7 3174 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 F2Z2F3 143 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 NPPCP23582 126 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms