RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 KPRPQ5T749 579 aaPredicted RBP15.99■□□□□ 0.15
SYNE2-201ENST00000341472 LIPKQ5VXJ0 399 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 STEAP3Q658P3 488 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 OR10K2Q6IF99 312 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 OR10V1Q8NGI7 309 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 OR2T10Q8NGZ9 312 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 CT45A3Q8NHU0 189 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 TMEM203Q969S6 136 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 NEDD4LQ96PU5 975 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 OR2S2Q9NQN1 319 aa15.99■□□□□ 0.15
SYNE2-201ENST00000341472 PSMB11A5LHX3 300 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 NCBP2LA6PVI3 153 aaKnown RBP15.98■□□□□ 0.15
SYNE2-201ENST00000341472 SLC31A2O15432 143 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 HSMCR30P0CW71 290 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 VSIG8P0DPA2 414 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 PF4V1P10720 104 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 CD37P11049 281 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 CD1BP29016 333 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 ZNF134P52741 427 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 TPBGQ13641 420 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 OXLD1Q5BKU9 147 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 NKAPLQ5M9Q1 402 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 C10orf99Q6UWK7 81 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 SLC25A48Q6ZT89 311 aaKnown RBP15.98■□□□□ 0.15
SYNE2-201ENST00000341472 ZNF554Q86TJ5 538 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 SPARTQ8N0X7 666 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 WFDC9Q8NEX5 89 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 KCNG3Q8TAE7 436 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 RTN4IP1Q8WWV3 396 aaPredicted RBP15.98■□□□□ 0.15
SYNE2-201ENST00000341472 VCX3AQ9NNX9 186 aa15.98■□□□□ 0.15
SYNE2-201ENST00000341472 MBNL3Q9NUK0 354 aaKnown RBP15.98■□□□□ 0.15
SYNE2-201ENST00000341472 SERPINE3A8MV23 424 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 UCHL1P09936 223 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 TBCEQ15813 527 aaPredicted RBP15.97■□□□□ 0.15
SYNE2-201ENST00000341472 ZNF329Q86UD4 541 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 ZNF439Q8NDP4 499 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 MRPL30Q8TCC3 161 aaKnown RBP15.97■□□□□ 0.15
SYNE2-201ENST00000341472 FCGR1BQ92637 280 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 FAAP24Q9BTP7 215 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 ISYNA1Q9NPH2 558 aa15.97■□□□□ 0.15
SYNE2-201ENST00000341472 PRKDCP78527 4128 aaKnown RBP15.96■□□□□ 0.15
SYNE2-201ENST00000341472 HTR2CP28335 458 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 RPS27AP62979 156 aaKnown RBP15.96■□□□□ 0.15
SYNE2-201ENST00000341472 TRAM1Q15629 374 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 MORN2Q502X0 79 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 KHDC1LQ5JSQ8 128 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 SLC35E3Q7Z769 313 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 TGIF2LXQ8IUE1 241 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 IZUMO1Q8IYV9 350 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 OR52L2PQ8NGH6 319 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 CHPT1Q8WUD6 406 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 CYYR1Q96J86 154 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 SULT4A1Q9BR01 284 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 TMEM59Q9BXS4 323 aa15.96■□□□□ 0.15
SYNE2-201ENST00000341472 TRIM64CA6NLI5 447 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 SLC22A1O15245 554 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 TXNL1O43396 289 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 MOSP00540 346 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 IGHG2P01859 326 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 CD33P20138 364 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 CHATP28329 748 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 ZNF137PP52743 207 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 TMEM91Q6ZNR0 172 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 FOXRED2Q8IWF2 684 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 Q8N6K4 173 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 OR6M1Q8NGM8 313 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 NOL4LQ96MY1 436 aaPredicted RBP15.95■□□□□ 0.14
SYNE2-201ENST00000341472 MRPS26Q9BYN8 205 aaKnown RBP15.95■□□□□ 0.14
SYNE2-201ENST00000341472 ACOT13Q9NPJ3 140 aa15.95■□□□□ 0.14
SYNE2-201ENST00000341472 ZNF736B4DX44 427 aaPredicted RBP15.94■□□□□ 0.14
SYNE2-201ENST00000341472 BPNT1O95861 308 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 PF4P02776 101 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 HTD2P86397 168 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 MLLT11Q13015 90 aaPredicted RBP15.94■□□□□ 0.14
SYNE2-201ENST00000341472 C6orf201Q7Z4U5 140 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 C5orf24Q7Z6I8 188 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 GALMQ96C23 342 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 TM2D1Q9BX74 207 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 PLSCR3Q9NRY6 295 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 SCOCQ9UIL1 159 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 LINC00527Q9UJ94 153 aa15.94■□□□□ 0.14
SYNE2-201ENST00000341472 TMEM14DPA8MWL7 114 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 LANCL1O43813 399 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 ARL6IP5O75915 188 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 RGS11O94810 467 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 PRB2P02812 416 aaPredicted RBP15.93■□□□□ 0.14
SYNE2-201ENST00000341472 CPEP16870 476 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 PSMA1P25786 263 aaKnown RBP15.93■□□□□ 0.14
SYNE2-201ENST00000341472 BLVRBP30043 206 aaPredicted RBP15.93■□□□□ 0.14
SYNE2-201ENST00000341472 MAP2K4P45985 399 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 RPS25P62851 125 aaKnown RBP15.93■□□□□ 0.14
SYNE2-201ENST00000341472 SLC35B1P78383 322 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 QRFPP83859 136 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 UNC119Q13432 240 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 ZNF367Q7RTV3 350 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 REC114Q7Z4M0 266 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 Q8N9W7 124 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 OR8H1Q8NGG4 311 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 MGLLQ99685 303 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 RASL11BQ9BPW5 248 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms