RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ZNF732B4DXR9 585 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 H7C1C5 153 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 TSPOP30536 169 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 LCN6P62502 163 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 RPL23P62829 140 aaKnown RBP10.19□□□□□ -0.78
RTN3-203ENST00000341307 RBPJQ06330 500 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 SLC17A1Q14916 467 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 MEP1BQ16820 701 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 TMEM41BQ5BJD5 291 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 PEAR1Q5VY43 1037 aaPredicted RBP10.19□□□□□ -0.78
RTN3-203ENST00000341307 CYP2G1PQ6ZSU1 146 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 ANKRD37Q7Z713 158 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 PLSCR4Q9NRQ2 329 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 PLA2G3Q9NZ20 509 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 FBXL7Q9UJT9 491 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 TRAV1-1A0A0B4J248 108 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 IGHV1-69-2A0A0G2JMI3 117 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 IGLC7A0M8Q6 106 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 ODAMA1E959 279 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 MEGF11A6BM72 1044 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 FAM24AA6NFZ4 105 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 HSPB2A8KAH6 182 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 IL3RAP26951 378 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 MTCP1P56278 107 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 SUMO1P63165 101 aaKnown RBP10.18□□□□□ -0.78
RTN3-203ENST00000341307 HSPB2Q16082 182 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 ZNF74Q16587 644 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 ZNF468Q5VIY5 522 aaPredicted RBP10.18□□□□□ -0.78
RTN3-203ENST00000341307 ZNF440Q8IYI8 595 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 OR4S2Q8NH73 311 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 B9D1Q9UPM9 204 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 HIF3AQ9Y2N7 669 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
RTN3-203ENST00000341307 TRAPPC1Q9Y5R8 145 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 COL5A1P20908 1838 aaPredicted RBP10.18□□□□□ -0.78
RTN3-203ENST00000341307 A0A1W2PNV4 684 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 IGSF23A1L1A6 192 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 LRRC3CA6NJW4 275 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 PITX3O75364 302 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 H2BFMP0C1H6 154 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 ESDP10768 282 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 FBXW4P57775 412 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 CDCP2Q5VXM1 449 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 NIT1Q86X76 327 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 ZNF441Q8N8Z8 693 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 CPT1CQ8TCG5 803 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 SLAMF6Q96DU3 332 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 MMP25Q9NPA2 562 aa10.18□□□□□ -0.78
RTN3-203ENST00000341307 AMY2BP19961 511 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 SFTPDP35247 375 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 GRK6P43250 576 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 DNASE1L1P49184 302 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 RPS4XP62701 263 aaKnown RBP10.17□□□□□ -0.78
RTN3-203ENST00000341307 OR4A47Q6IF82 309 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 TCF24Q7RTU0 167 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 OR5AU1Q8NGC0 362 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 BTF3L4Q96K17 158 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 UHRF2Q96PU4 802 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 P2RX4Q99571 388 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 C11orf1Q9H5F2 150 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 SLC35D1Q9NTN3 355 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 CRYM-AS1A6NIL9 109 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 SERPINE3A8MV23 424 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 ALG1L2C9J202 215 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 SH2D1BO14796 132 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 PPIAL4GP0DN37 164 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 PNMTP11086 282 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 ADMP35318 185 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 PLA2G5P39877 138 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 LYZL2Q7Z4W2 148 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 OR52L2PQ8NGH6 319 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 SARAFQ96BY9 339 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 STARD4Q96DR4 205 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 WDYHV1Q96HA8 205 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 NUDT16L1Q9BRJ7 211 aaKnown RBP10.17□□□□□ -0.78
RTN3-203ENST00000341307 AGMATQ9BSE5 352 aa10.17□□□□□ -0.78
RTN3-203ENST00000341307 MRPL13Q9BYD1 178 aaKnown RBP10.17□□□□□ -0.78
RTN3-203ENST00000341307 IGLV3-12A0A075B6K2 115 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 GAGE12BA1L429 117 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 OR6C6A6NF89 314 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 ZNF891A8MT65 544 aaPredicted RBP10.16□□□□□ -0.78
RTN3-203ENST00000341307 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 SOCS1O15524 211 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 ST8SIA3O43173 380 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 SERF1AO75920 110 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 CTXN1P60606 82 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 ALG10Q5BKT4 473 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 FFAR4Q5NUL3 377 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 NFAM1Q8NET5 270 aaPredicted RBP10.16□□□□□ -0.78
RTN3-203ENST00000341307 OTOSQ8NHW6 89 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 GPX7Q96SL4 187 aaPredicted RBP10.16□□□□□ -0.78
RTN3-203ENST00000341307 PATZ1Q9HBE1 687 aaKnown RBP10.16□□□□□ -0.78
RTN3-203ENST00000341307 AKAP13Q12802 2813 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 ZFHX4Q86UP3 3567 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 SERTM2A0A1B0GWG4 89 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 ASAH2BP0C7U1 165 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms