RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 SSMEM1Q8WWF3 244 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 CMTM3Q96MX0 182 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 CMSS1Q9BQ75 279 aaKnown RBP11.51□□□□□ -0.57
CTSL-201ENST00000340342 MIXL1Q9H2W2 232 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 KCNIP1Q9NZI2 227 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 ADAM30Q9UKF2 790 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 PSG11Q9UQ72 335 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 HILPDAQ9Y5L2 63 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 POMT1Q9Y6A1 747 aa11.51□□□□□ -0.57
CTSL-201ENST00000340342 TOR1AO14656 332 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 HPGDSO60760 199 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 TNFSF8P32971 234 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 IER3P46695 156 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 GNMTQ14749 295 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 HMGN3Q15651 99 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 SSX2Q16385 188 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 SAMD12Q8N8I0 201 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 BEND2Q8NDZ0 799 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
CTSL-201ENST00000340342 TBL2Q9Y4P3 447 aaKnown RBP11.5□□□□□ -0.57
CTSL-201ENST00000340342 TRBV6-6A0A0A6YYG2 114 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 TMEM235A6NFC5 223 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 J3QR06 171 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 CD3GP09693 182 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 HKR1P10072 659 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 HTR1DP28221 377 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 FOXL1Q12952 345 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 HLA-DRB5Q30154 266 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 CDNFQ49AH0 187 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 C12orf54Q6X4T0 127 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 MOB1BQ7L9L4 216 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 LAX1Q8IWV1 398 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 IZUMO1Q8IYV9 350 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 DTX3Q8N9I9 347 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 OR52M1Q8NGK5 317 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 ZNF596Q8TC21 504 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 S100ZQ8WXG8 99 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 MAFIPQ8WZ33 124 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 TAF15Q92804 592 aaKnown RBP eCLIP11.49□□□□□ -0.57
CTSL-201ENST00000340342 CHIAQ9BZP6 476 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 DPAGT1Q9H3H5 408 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 RIMS4Q9H426 269 aaPredicted RBP11.49□□□□□ -0.57
CTSL-201ENST00000340342 Q9N2K0 584 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 GNG12Q9UBI6 72 aa11.49□□□□□ -0.57
CTSL-201ENST00000340342 ZNF230Q9UIE0 474 aaPredicted RBP11.49□□□□□ -0.57
CTSL-201ENST00000340342 SERPINE3A8MV23 424 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 H3BUX3 64 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 SLC31A2O15432 143 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 APOA1P02647 267 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 FCGR3AP08637 254 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 RAB13P51153 203 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 PRRX1P54821 245 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
CTSL-201ENST00000340342 ARFRP1Q13795 201 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 UBE2NLQ5JXB2 153 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 MINOS1Q5TGZ0 78 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 ZNF554Q86TJ5 538 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 CCDC190Q86UF4 302 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 NUDCD2Q8WVJ2 157 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 IL1F10Q8WWZ1 152 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 MALSU1Q96EH3 234 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 DIRAS2Q96HU8 199 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 SSX3Q99909 188 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 MMP28Q9H239 520 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 AKIP1Q9NQ31 210 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 OR2S2Q9NQN1 319 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 MINOS1-NBL1R4GNA1 71 aa11.48□□□□□ -0.57
CTSL-201ENST00000340342 TRAV18A0A075B6X5 111 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 FAM25AB3EWG3 89 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 FAM25CB3EWG5 89 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 FAM25GB3EWG6 89 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 SCGNO76038 276 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 SCTP09683 121 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 ELK1P19419 428 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 PPP1CCP36873 323 aaKnown RBP11.47□□□□□ -0.57
CTSL-201ENST00000340342 ETV6P41212 452 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 RPL15P61313 204 aaKnown RBP11.47□□□□□ -0.57
CTSL-201ENST00000340342 HLA-DRB3P79483 266 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 ZNF846Q147U1 533 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 LRRC75BQ2VPJ9 315 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 ZNF260Q3ZCT1 412 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 HACD4Q5VWC8 232 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 PHF21AQ96BD5 680 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 GALMQ96C23 342 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 RAB9BQ9NP90 201 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.47□□□□□ -0.57
CTSL-201ENST00000340342 DPM3Q9P2X0 92 aa11.47□□□□□ -0.57
CTSL-201ENST00000340342 LEUTXA8MZ59 168 aa11.46□□□□□ -0.57
CTSL-201ENST00000340342 LY6LH3BQJ8 138 aa11.46□□□□□ -0.57
CTSL-201ENST00000340342 CRYBA1P05813 215 aa11.46□□□□□ -0.57
CTSL-201ENST00000340342 EIF4EP06730 217 aaKnown RBP11.46□□□□□ -0.57
CTSL-201ENST00000340342 PTHLHP12272 177 aa11.46□□□□□ -0.57
CTSL-201ENST00000340342 ZNF134P52741 427 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms