RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 HIST1H1DP16402 221 aaKnown RBP12.28□□□□□ -0.44
UBE3B-201ENST00000340074 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 SERPINB10P48595 397 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 DYNLT3P51808 116 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 SCAND1P57086 179 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 HTD2P86397 168 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 MADCAM1Q13477 382 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 DIAPH2-AS1Q14236 149 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 GNMTQ14749 295 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 DHRS7BQ6IAN0 325 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-201ENST00000340074 C12orf54Q6X4T0 127 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 ANKRD13BQ86YJ7 626 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 CROCCP3Q8IVE0 287 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 ZNF439Q8NDP4 499 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 OR52L2PQ8NGH6 319 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 RPEQ96AT9 228 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 NAA50Q9GZZ1 169 aaKnown RBP12.28□□□□□ -0.44
UBE3B-201ENST00000340074 Q9N2K0 584 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 ABRACLQ9P1F3 81 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 TCF19Q9Y242 345 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 ETV7Q9Y603 341 aa12.28□□□□□ -0.44
UBE3B-201ENST00000340074 SLC31A2O15432 143 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 CHST1O43916 411 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 CD3GP09693 182 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-201ENST00000340074 ZNF134P52741 427 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 RAG2P55895 527 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.45
UBE3B-201ENST00000340074 Q3ZCU0 254 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 MORN2Q502X0 79 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 GPR107Q5VW38 600 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 CCBE1Q6UXH8 406 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-201ENST00000340074 TMEM219Q86XT9 240 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 LINC00311Q8N616 119 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 C8orf31Q8N9H6 132 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 IL1F10Q8WWZ1 152 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 TOMM40LQ969M1 308 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 OCSTAMPQ9BR26 566 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 RHBDL2Q9NX52 303 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 JPT1Q9UK76 154 aa12.27□□□□□ -0.45
UBE3B-201ENST00000340074 A6NDX4 124 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 OOSP1A8MZH6 123 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 TMEM127O75204 238 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 NDUFA7O95182 113 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 CD24P25063 80 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
UBE3B-201ENST00000340074 ARHGDIBP52566 201 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 CTF1Q16619 201 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 CCDC144NLQ6NUI1 221 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 SLC25A48Q6ZT89 311 aaKnown RBP12.26□□□□□ -0.45
UBE3B-201ENST00000340074 GPR141Q7Z602 305 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 OR4F5Q8NH21 305 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 SLC25A46Q96AG3 418 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 SLC25A38Q96DW6 304 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 ELF5Q9UKW6 265 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-201ENST00000340074 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
UBE3B-201ENST00000340074 POM121CA8CG34 1229 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 YPEL1O60688 119 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 SCGNO76038 276 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 GABARAPO95166 117 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 FCGR3AP08637 254 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 SCTP09683 121 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 BRS3P32247 399 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 MNDAP41218 407 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 RAB7AP51149 207 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 Q6ZSV7 163 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 YPEL2Q96QA6 119 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBE3B-201ENST00000340074 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
UBE3B-201ENST00000340074 A0A1W2PPI3 338 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 HSD17B6O14756 317 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 TIMM23O14925 209 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 REG1BP48304 166 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 ARL6IP1Q15041 203 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 FBLN7Q53RD9 439 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 ST6GALNAC6Q969X2 333 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-201ENST00000340074 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
UBE3B-201ENST00000340074 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 TRDCB7Z8K6 153 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 TSPAN9O75954 239 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 RGS11O94810 467 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 IL3RAP26951 378 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 TALDO1P37837 337 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 ZNF816Q0VGE8 651 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-201ENST00000340074 LY6G6FQ5SQ64 297 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 HACD4Q5VWC8 232 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 STEAP3Q658P3 488 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 OR8H3Q8N146 312 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 DRAM1Q8N682 238 aa12.23□□□□□ -0.45
UBE3B-201ENST00000340074 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms