RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 EBF4Q9BQW3 602 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF665Q9H7R5 613 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 CCL26Q9Y258 94 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 C7orf66A4D0T2 115 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 FAM181BA6NEQ2 426 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 SLC25A20O43772 301 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 GPX3P22352 226 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 TGFBR1P36897 503 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 NXPH1P58417 271 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 SRSF9Q13242 221 aaKnown RBP eCLIP2.9□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM236Q5W0B7 351 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 LIAT1Q6ZQX7 453 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 CCDC190Q86UF4 302 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 PDPNQ86YL7 162 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 GATSQ8NAP1 163 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 SLC25A40Q8TBP6 338 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 GATAD1Q8WUU5 269 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 GLIPR2Q9H4G4 154 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 CHTOPQ9Y3Y2 248 aaKnown RBP2.9□□□□□ -1.95
CSMD3-202ENST00000339701 FEZF1A0PJY2 475 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 H3BRM9 83 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 HLA-DRB1P01911 266 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF17P17021 662 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 POU3F1Q03052 451 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-202ENST00000339701 FAM90A1Q86YD7 464 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 SAXO1Q8IYX7 474 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 NAA60Q9H7X0 242 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 METTL1Q9UBP6 276 aaKnown RBP2.9□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF443Q9Y2A4 671 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-202ENST00000339701 PPIL1Q9Y3C6 166 aa2.9□□□□□ -1.95
CSMD3-202ENST00000339701 M0R135 149 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 KLK8O60259 260 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 LTBRP36941 435 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 ACAA2P42765 397 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 P2RY6Q15077 328 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF799Q96GE5 643 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OXGR1Q96P68 337 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 DAPP1Q9UN19 280 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 ZFP92A6NM28 416 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 F13BP05160 661 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 GALR1P47211 349 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 MYPOPQ86VE0 399 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR10G8Q8NGN5 311 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 PPP1R1CQ8WVI7 109 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 TMED6Q8WW62 240 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SLAMF6Q96DU3 332 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 MCRIP2Q9BUT9 160 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 PLA2G3Q9NZ20 509 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 NPTNQ9Y639 398 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 IGLV3-10A0A075B6K4 115 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 MEIKINA0A087WXM9 373 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 HS3ST1O14792 307 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SYNGR2O43760 224 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SLC25A5P05141 298 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 PLNP26678 52 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 LIMS1P48059 325 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 CTSCP53634 463 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 RPL8P62917 257 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 RELQ04864 619 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR1Q1Q15612 314 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 C2orf68Q2NKX9 166 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 NSUN5P2Q63ZY6 315 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 GLRX5Q86SX6 157 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 CLEC14AQ86T13 490 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR10G4Q8NGN3 311 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR52N5Q8NH56 324 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR13C6PQ8NH95 151 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 C8orf46Q8TAG6 207 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 TMIGD2Q96BF3 282 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 BOCQ9BWV1 1114 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 MRPL37Q9BZE1 423 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 AP5S1Q9NUS5 200 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 CISD1Q9NZ45 108 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 GDF2Q9UK05 429 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 KCNK7Q9Y2U2 307 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 ARHGAP32A7KAX9 2087 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 A0A087X0M5 115 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 A0A1B0GX30 115 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 A0A1W2PQD3 144 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 PPP6CO00743 305 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 EFSO43281 561 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 FGF17O60258 216 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 C1orf105O95561 183 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 PPOXP50336 477 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF750Q32MQ0 723 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SNAI3Q3KNW1 292 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 PRR18Q8N4B5 295 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SMIM20Q8N5G0 67 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR9G4Q8NGQ1 327 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 OR2Y1Q8NGV0 311 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SP7Q8TDD2 431 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 RNASE6Q93091 150 aaKnown RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 FAM131CQ96AQ9 280 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 C16orf92Q96LL3 132 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SYT11Q9BT88 431 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 NPFFR1Q9GZQ6 430 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 CXorf36Q9H7Y0 433 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 SIRT4Q9Y6E7 314 aaPredicted RBP2.89□□□□□ -1.95
CSMD3-202ENST00000339701 A0A0U1RQV5 110 aa2.89□□□□□ -1.95
CSMD3-202ENST00000339701 H0YGG7 62 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms