RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GSKIPQ9P0R6 139 aa13.58□□□□□ -0.24
HPS1-202ENST00000338546 RNF115Q9Y4L5 304 aa13.58□□□□□ -0.24
HPS1-202ENST00000338546 KANTRA0A1W2PQU2 76 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 H0YIZ8 118 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 ATXN7O15265 892 aaPredicted RBP13.57□□□□□ -0.24
HPS1-202ENST00000338546 BCL2L11O43521 198 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 P2RX3P56373 397 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 RAB32Q13637 225 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 SELENOHQ8IZQ5 122 aaKnown RBP13.57□□□□□ -0.24
HPS1-202ENST00000338546 PRR18Q8N4B5 295 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 OR13A1Q8NGR1 328 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 MRGPRDQ8TDS7 321 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 DCUN1D4Q92564 292 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 ABHD14BQ96IU4 210 aa13.57□□□□□ -0.24
HPS1-202ENST00000338546 IGHV3OR15-7A0A075B7D8 119 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 CLEC18AA5D8T8 446 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 NKX2-6A6NCS4 301 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 C15orf65H3BRN8 121 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 IGLV2-14P01704 120 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 HTR2BP41595 481 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 UBA52P62987 128 aaKnown RBP13.56□□□□□ -0.24
HPS1-202ENST00000338546 HOXA4Q00056 320 aaPredicted RBP13.56□□□□□ -0.24
HPS1-202ENST00000338546 EXOSC2Q13868 293 aaKnown RBP13.56□□□□□ -0.24
HPS1-202ENST00000338546 TMEM268Q5VZI3 342 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 ZNF788Q6ZQV5 615 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 ZNF808Q8N4W9 903 aaPredicted RBP13.56□□□□□ -0.24
HPS1-202ENST00000338546 ZNF645Q8N7E2 425 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 CLEC18CQ8NCF0 446 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 LHFPL5Q8TAF8 219 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 RBPMSQ93062 196 aaKnown RBP13.56□□□□□ -0.24
HPS1-202ENST00000338546 ARL11Q969Q4 196 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 C14orf79Q96F83 325 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 AQP10Q96PS8 301 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 SAP30LQ9HAJ7 183 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 RBM7Q9Y580 266 aaKnown RBP13.56□□□□□ -0.24
HPS1-202ENST00000338546 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
HPS1-202ENST00000338546 TRAV38-1A0A0B4J264 116 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 LGALS8O00214 317 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 OR8U9P0C7N5 309 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 SLC25A6P12236 298 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 AGAP20933 346 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 VDAC1P21796 283 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 S100A1P23297 94 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 CD80P33681 288 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 TMEM30BQ3MIR4 351 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 TCTEX1D1Q8N7M0 179 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 SLC35G3Q8N808 338 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 OR8U1Q8NH10 309 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 EDARADDQ8WWZ3 215 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 PLEKHF2Q9H8W4 249 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 FAM212BQ9NTI7 297 aaPredicted RBP13.55□□□□□ -0.24
HPS1-202ENST00000338546 LIN7CQ9NUP9 197 aaKnown RBP13.55□□□□□ -0.24
HPS1-202ENST00000338546 JPT1Q9UK76 154 aa13.55□□□□□ -0.24
HPS1-202ENST00000338546 DYSFO75923 2080 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 MED19A0JLT2 244 aaPredicted RBP13.54□□□□□ -0.24
HPS1-202ENST00000338546 F2RL2O00254 374 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 ITGB1BP1O14713 200 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 SIGLEC5O15389 551 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 DEDDO75618 318 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
HPS1-202ENST00000338546 TFF1P04155 84 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 RAB14P61106 215 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 CCL8P80075 99 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 CLLU1Q5K131 121 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 MEX3BQ6ZN04 569 aaKnown RBP13.54□□□□□ -0.24
HPS1-202ENST00000338546 ARPC5LQ9BPX5 153 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 TMEM204Q9BSN7 226 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 GSX2Q9BZM3 304 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 OR2S2Q9NQN1 319 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 ICE1Q9Y2F5 2266 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 KIAA2026Q5HYC2 2103 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 NKX6-3A6NJ46 265 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 YPEL1O60688 119 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 CFDP00746 253 aaPredicted RBP13.54□□□□□ -0.24
HPS1-202ENST00000338546 SERPINE2P07093 398 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 AP2S1P53680 142 aaPredicted RBP13.54□□□□□ -0.24
HPS1-202ENST00000338546 TFF3Q07654 80 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 EDDM3AQ14507 147 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 MST1LQ2TV78 715 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 SLC7A5P1Q8MH63 180 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 DRAM1Q8N682 238 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 ZNRF1Q8ND25 227 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 SCARB1Q8WTV0 552 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 GAFA1Q96PS6 74 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 YPEL2Q96QA6 119 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 PLEKHA2Q9HB19 425 aa13.54□□□□□ -0.24
HPS1-202ENST00000338546 CISD1Q9NZ45 108 aaKnown RBP13.54□□□□□ -0.24
HPS1-202ENST00000338546 E5RGE8 158 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 TMEM178BH3BS89 294 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 TAAR5O14804 337 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 ST8SIA3O43173 380 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 CGB3P0DN86 165 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 CGB7P0DN87 165 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 SSTR5P35346 364 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 S100A10P60903 97 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms