RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SLC38A6Q8IZM9 456 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF431Q8TF32 576 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NINJ1Q92982 152 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 FAHD2AQ96GK7 314 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SLC5A7Q9GZV3 580 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 C9orf170A2RU37 121 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 A8MV72 311 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CCNKO75909 580 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 IGHV4-39P01824 125 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GNRHRP30968 328 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GPR6P46095 362 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PIGPP57054 158 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 HTD2P86397 168 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF273Q14593 569 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TMEM155Q4W5P6 130 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PHLDA2Q53GA4 152 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CD276Q5ZPR3 534 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF841Q6ZN19 808 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LYG2Q86SG7 212 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR10V1Q8NGI7 309 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NRGNQ92686 78 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CORO2AQ92828 525 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RSRP1Q9BUV0 290 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NARFLQ9H6Q4 476 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CCL28Q9NRJ3 127 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 KBTBD11-OT1A0A1B0GTJ5 212 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF818PQ6ZRF7 136 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF525Q8N782 197 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 UXS1Q8NBZ7 420 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR11H7Q8NGC8 314 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 UBE2J1Q9Y385 318 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RBM7Q9Y580 266 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF729A6NN14 1252 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 F2RL2O00254 374 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 HSD17B6O14756 317 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 WNT2P09544 360 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TMEM200BQ69YZ2 307 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 FAM185AQ8N0U4 392 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR8B3Q8NGG8 313 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR8B2Q96RD0 313 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TOLLIPQ9H0E2 274 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SLC2A9Q9NRM0 540 aa12.18□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SFT2D2O95562 160 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR8U9P0C7N5 309 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CXCL3P19876 107 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LOXL3P58215 753 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CD83Q01151 205 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SLC9A3R2Q15599 337 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 C12orf45Q8N5I9 185 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR8U1Q8NH10 309 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF486Q96H40 463 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RAB9BQ9NP90 201 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GNG12Q9UBI6 72 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GPR31O00270 319 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SULT1A3P0DMM9 295 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SULT1A4P0DMN0 295 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CCL3L1P16619 93 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LIN54Q6MZP7 749 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SGPP2Q8IWX5 399 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RTN4IP1Q8WWV3 396 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF714Q96N38 554 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PATZ1Q9HBE1 687 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TAS2R3Q9NYW6 316 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LPAR3Q9UBY5 353 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RNF150Q9ULK6 438 aa12.17□□□□□ -0.46
CDK5RAP3-201ENST00000338399 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CRYBG3Q68DQ2 2970 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MALRD1Q5VYJ5 2156 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MMP23AO75900 390 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CD34P28906 385 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 C2orf68Q2NKX9 166 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MORN2Q502X0 79 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PRAMEF5Q5TYX0 476 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 WDR25Q64LD2 544 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ZNF787Q6DD87 383 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR2AK2Q8NG84 335 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms