RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SULT1C2O00338 296 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 FABP7O15540 132 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 SSX5O60225 188 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 IGLV1-47P01700 117 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 SCTP09683 121 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 CTXN2P0C2S0 81 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 ZBTB25P24278 435 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 S100A5P33763 92 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 IL1F10Q8WWZ1 152 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 PRDM13Q9H4Q3 707 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 SCPEP1Q9HB40 452 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 FAM96BQ9Y3D0 163 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 IFNA2P01563 188 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 HTR1DP28221 377 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 TNFSF8P32971 234 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 SAA4P35542 130 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 MORN2Q502X0 79 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 RUSC1-AS1Q66K80 236 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
SEC13-201ENST00000337354 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 BCL6BQ8N143 479 aaPredicted RBP12.5□□□□□ -0.41
SEC13-201ENST00000337354 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 UBALD1Q8TB05 177 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 C22orf15Q8WYQ4 148 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 WNK2Q9Y3S1 2297 aa12.5□□□□□ -0.41
SEC13-201ENST00000337354 ANK3Q12955 4377 aaKnown RBP12.49□□□□□ -0.41
SEC13-201ENST00000337354 A0A1W2PRD5 423 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 A0A1W2PRF3 423 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 A0A1W2PRM7 423 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 LEUTXA8MZ59 168 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 LPLP06858 475 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 FBP1P09467 338 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 GSTT2BP0CG30 244 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 CEACAM3P40198 252 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 MRPS10P82664 201 aaKnown RBP12.49□□□□□ -0.41
SEC13-201ENST00000337354 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 PYHIN1Q6K0P9 492 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 ZNF418Q8TF45 676 aaPredicted RBP12.49□□□□□ -0.41
SEC13-201ENST00000337354 MEGF9Q9H1U4 602 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 MMP28Q9H239 520 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 GHITMQ9H3K2 345 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 DPM3Q9P2X0 92 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 ANXA10Q9UJ72 324 aa12.49□□□□□ -0.41
SEC13-201ENST00000337354 AMMECR1Q9Y4X0 333 aaPredicted RBP12.49□□□□□ -0.41
SEC13-201ENST00000337354 A0A0A6YYJ9 748 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 IGHV3-43A0A0B4J1X8 118 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 A0A0U1RQK1 487 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 ITGB1BP1O14713 200 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 HSPA12AO43301 675 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 IGHV3-43DP0DP04 118 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 PTHLHP12272 177 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 CEACAM6P40199 344 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
SEC13-201ENST00000337354 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 MAFIPQ8WZ33 124 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 ABHD1Q96SE0 405 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 TOLLIPQ9H0E2 274 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 SLC23A1Q9UHI7 598 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 JMJD1CQ15652 2540 aa12.48□□□□□ -0.41
SEC13-201ENST00000337354 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 FAM172BPA6NC97 362 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 FABP12A6NFH5 140 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 CTDSPLO15194 276 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 KRTAP21-3Q3LHN1 58 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 C5orf24Q7Z6I8 188 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 ZNF439Q8NDP4 499 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 OR10V1Q8NGI7 309 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 OR10X1Q8NGY0 326 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 OR10J5Q8NHC4 309 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 EDARADDQ8WWZ3 215 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 LEAP2Q969E1 77 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 ZDHHC16Q969W1 377 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 JMJD8Q96S16 334 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 SLC6A7Q99884 636 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 SOSTQ9BQB4 213 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 IFT46Q9NQC8 304 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 ANAPC10Q9UM13 185 aa12.47□□□□□ -0.41
SEC13-201ENST00000337354 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 OOSP1A8MZH6 123 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 IGHV3-7P01780 117 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 NAT1P18440 290 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.412e-7■■■■■ 31.3
SEC13-201ENST00000337354 IL3RAP26951 378 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms