RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PDLIM4P50479 330 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
FN1-202ENST00000336916 DSPPQ9NZW4 1301 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 IGHV1-45A0A0A0MS14 117 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 PTGDSP41222 190 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 PSG6Q00889 435 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
FN1-202ENST00000336916 GGTLC2Q14390 218 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 CEACAM21Q3KPI0 293 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 RSRP1Q9BUV0 290 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 LIPGQ9Y5X9 500 aa10.74□□□□□ -0.69
FN1-202ENST00000336916 MFNGO00587 321 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 HPRT1P00492 218 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 LBHQ53QV2 105 aaPredicted RBP10.73□□□□□ -0.69
FN1-202ENST00000336916 RNFT1Q5M7Z0 435 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 FAM210BQ96KR6 192 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 WASHC3Q9Y3C0 194 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 GZMKP49863 264 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 CLDN18P56856 261 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 CTF1Q16619 201 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 VSIG4Q9Y279 399 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 KLRB1Q12918 225 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 C1QAP02745 245 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 CEACAM1P13688 526 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 SELENOPP49908 381 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 DYNLT3P51808 116 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 PPP1R1AQ13522 171 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.73□□□□□ -0.69
FN1-202ENST00000336916 RAB24Q969Q5 203 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 JMJD8Q96S16 334 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 TRBV23-1A0A0A0MS06 115 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 HELTA6NFD8 242 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 B4GALT3O60512 393 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 OR5AL1P0C617 328 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 NUP37Q8NFH4 326 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 A0A1W2PNV4 684 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 DEFB108AA8MXU0 73 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 CLLU1Q5K131 121 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 C16orf82Q7Z2V1 217 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 STARD4Q96DR4 205 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 ZMAT5Q9UDW3 170 aaKnown RBP10.73□□□□□ -0.69
FN1-202ENST00000336916 SHISA8B8ZZ34 492 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 GFRA3O60609 400 aa10.73□□□□□ -0.69
FN1-202ENST00000336916 PTPMT1Q8WUK0 201 aaPredicted RBP10.73□□□□□ -0.69
FN1-202ENST00000336916 CDIPTO14735 213 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 SEMG1P04279 462 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 ETFDHQ16134 617 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 FAM27D1Q5T7N8 215 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 MRGPRGQ86SM5 289 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 ZNF721Q8TF20 911 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 SLIRPQ9GZT3 109 aaKnown RBP10.72□□□□□ -0.69
FN1-202ENST00000336916 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 KIAA1549Q9HCM3 1950 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 ANKRD20A5PA0PJZ0 165 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 B9A039 149 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 J3QR06 171 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 MGST3O14880 152 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
FN1-202ENST00000336916 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 RFESDQ8TAC1 157 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 CCL3P10147 92 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 CBR1P16152 277 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 RPS27P42677 84 aaKnown RBP10.72□□□□□ -0.69
FN1-202ENST00000336916 MMDQ15546 238 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 UNQ9370/PRO34162Q6UXP9 181 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 ANGPTL6Q8NI99 470 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 TMEFF2Q9UIK5 374 aaPredicted RBP10.72□□□□□ -0.69
FN1-202ENST00000336916 CDC42EP3Q9UKI2 254 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 C11orf94C9JXX5 98 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 SMPD2O60906 423 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 SULT1A1P50225 295 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 COTL1Q14019 142 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 LRP11Q86VZ4 500 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 TMEM116Q8NCL8 245 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 COX5BP10606 129 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 VAMP3Q15836 100 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 TM4SF20Q53R12 229 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 SCNM1Q9BWG6 230 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 HIGD1AQ9Y241 93 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 FAM106AQ4KMX7 169 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 TEX30Q5JUR7 227 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 DNM1P46Q6ZS02 220 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 ADIPOR1Q96A54 375 aa10.72□□□□□ -0.69
FN1-202ENST00000336916 ZNF501Q96CX3 271 aaPredicted RBP10.72□□□□□ -0.69
FN1-202ENST00000336916 RPL36A-HNRNPH2H7BZ11 118 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 ISG15P05161 165 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 CT62P0C5K7 136 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 ZNF735P0CB33 412 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 ERGP11308 486 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 UCP2P55851 309 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 MMD2Q8IY49 270 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 ZNF645Q8N7E2 425 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 RBFOX3A6NFN3 312 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 KCNAB3O43448 404 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 PPP1R17O96001 155 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 PRDX2P32119 198 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 FGF12P61328 243 aa10.71□□□□□ -0.69
FN1-202ENST00000336916 NUTF2P61970 127 aaKnown RBP10.71□□□□□ -0.69
FN1-202ENST00000336916 OR4C13Q8NGP0 309 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms