RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-201ENST00000334136 SLC2A9Q9NRM0 540 aa10.17□□□□□ -0.78
HDAC6-201ENST00000334136 C3orf85A0A1B0GTC6 90 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 C17orf112F2Z3M2 114 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 IGHMP01871 453 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 MBP02144 154 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 LHFPL2Q6ZUX7 228 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 RNF133Q8WVZ7 376 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 BOD1Q96IK1 185 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 SH2D2AQ9NP31 389 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 RPH3ALQ9UNE2 315 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 TRAV14DV4A0A0A6YYC5 116 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF716A6NP11 495 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 G3V3Q6 166 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 SULT1A2P50226 295 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 C21orf62-AS1Q17RA5 79 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF391Q9UJN7 358 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 FOXD3Q9UJU5 478 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-201ENST00000334136 RNF212BA8MTL3 300 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 H0Y8G0 127 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 CTSDP07339 412 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-201ENST00000334136 P2RY4P51582 365 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 DYNLT3P51808 116 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 KLF3P57682 345 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-201ENST00000334136 PLAURQ03405 335 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 RNF151Q2KHN1 245 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 OR10P1Q8NGE3 313 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 LPAR5Q9H1C0 372 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF107Q9UII5 783 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-201ENST00000334136 GPR132Q9UNW8 380 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 PHF3Q92576 2039 aaKnown RBP10.16□□□□□ -0.78
HDAC6-201ENST00000334136 CADP27708 2225 aa10.16□□□□□ -0.78
HDAC6-201ENST00000334136 RNF222A6NCQ9 220 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 OR5H1A6NKK0 313 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 SPRY3O43610 288 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 GNLYP22749 145 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 SRSF3P84103 164 aaKnown RBP10.15□□□□□ -0.78
HDAC6-201ENST00000334136 ZNF154Q13106 437 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 ZDHHC23Q8IYP9 409 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 ST6GALNAC3Q8NDV1 305 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 OR13G1Q8NGZ3 307 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 HIST1H2BAQ96A08 127 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 ADGRG7Q96K78 797 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 RNF122Q9H9V4 155 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 ELOVL5Q9NYP7 299 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 COL5A1P20908 1838 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-201ENST00000334136 CHST1O43916 411 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 TRGC2P03986 189 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 ATP6V0CP27449 155 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 CALCRP30988 508 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 TIMP3P35625 211 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 GPM6AP51674 278 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 IL13RA2Q14627 380 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 TOMM20LQ6UXN7 152 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 HOGA1Q86XE5 327 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 TMEM54Q969K7 222 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 GPR61Q9BZJ8 451 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 SLC25A22Q9H936 323 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 MSL2Q9HCI7 577 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 CTXN2P0C2S0 81 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 MMP9P14780 707 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 C10orf128Q5T292 105 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 H2BFWTQ7Z2G1 175 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 CYB561D1Q8N8Q1 229 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 LRRC75AQ8NAA5 344 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 GPHA2Q96T91 129 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 C5orf66Q9H5L9 145 aa10.15□□□□□ -0.78
HDAC6-201ENST00000334136 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 NKX2-6A6NCS4 301 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 PRR32B1ATL7 298 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 SPINK4O60575 86 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 SS18L1O75177 396 aaPredicted RBP10.15□□□□□ -0.79
HDAC6-201ENST00000334136 ACTL6BO94805 426 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 HEXAP06865 529 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 PAX6P26367 422 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 KRTDAPP60985 99 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 SSTP61278 116 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 FOXF2Q12947 444 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 UBE2V2Q15819 145 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 LIAT1Q6ZQX7 453 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 ERGIC1Q969X5 290 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 SPSB1Q96BD6 273 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 MAP1LC3BQ9GZQ8 125 aa10.15□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF732B4DXR9 585 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 RAB4AP20338 218 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 PPP1CCP36873 323 aaKnown RBP10.14□□□□□ -0.79
HDAC6-201ENST00000334136 SNCAP37840 140 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 EWSR1Q01844 656 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC6-201ENST00000334136 OR8B8Q15620 311 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 PLAC9Q5JTB6 97 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 IL22RA2Q969J5 263 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 NTNG2Q96CW9 530 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 BTF3L4Q96K17 158 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 OR51M1Q9H341 326 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 AURKAIP1Q9NWT8 199 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-201ENST00000334136 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 H0YL77 283 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 ZNF816Q0VGE8 651 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-201ENST00000334136 IGFBP7Q16270 282 aa10.14□□□□□ -0.79
HDAC6-201ENST00000334136 OR2Z1Q8NG97 314 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms