RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ZNF471Q9BX82 626 aaPredicted RBP12.48□□□□□ -0.41
TPM3-205ENST00000328159 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
TPM3-205ENST00000328159 CHD8Q9HCK8 2581 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 ARID1AO14497 2285 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 DYSFO75923 2080 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 ATRXP46100 2492 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 DUXBA0A1W2PPF3 345 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 MSGN1A6NI15 193 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 SHISA9B4DS77 424 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 MGST3O14880 152 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 DEDDO75618 318 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 CYB5R3P00387 301 aaPredicted RBP12.48□□□□□ -0.41
TPM3-205ENST00000328159 MBPP02686 304 aaPredicted RBP12.48□□□□□ -0.41
TPM3-205ENST00000328159 RLN2P04090 185 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 OR8U9P0C7N5 309 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 OR52L2PQ8NGH6 319 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 OR8U1Q8NH10 309 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 PCNPQ8WW12 178 aaKnown RBP12.48□□□□□ -0.41
TPM3-205ENST00000328159 PLPPR2Q96GM1 343 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 TOLLIPQ9H0E2 274 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 COQ3Q9NZJ6 369 aa12.48□□□□□ -0.41
TPM3-205ENST00000328159 ODAMA1E959 279 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 NKX2-6A6NCS4 301 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
TPM3-205ENST00000328159 ADORA2A-AS1P86434 159 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 LY6DQ14210 128 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 DMRTC2Q8IXT2 367 aaPredicted RBP12.47□□□□□ -0.41
TPM3-205ENST00000328159 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 ARL11Q969Q4 196 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 DCTN5Q9BTE1 182 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 PPP1R3CQ9UQK1 317 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 DSCAMO60469 2012 aa12.47□□□□□ -0.41
TPM3-205ENST00000328159 E7EQL1 145 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 K7EPK0 472 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 K7N7A8 449 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 IRF2P14316 349 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 TNFRSF1AP19438 455 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 SSTR5P35346 364 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 CCL8P80075 99 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 TLE1Q04724 770 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.41
TPM3-205ENST00000328159 GNMTQ14749 295 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 FAM71E2Q8N5Q1 922 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 OR51H1Q8NH63 302 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 NINJ1Q92982 152 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.41
TPM3-205ENST00000328159 SPIN2AQ99865 258 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 SPIN2BQ9BPZ2 258 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.41
TPM3-205ENST00000328159 RAI1Q7Z5J4 1906 aaPredicted RBP12.46□□□□□ -0.41
TPM3-205ENST00000328159 C15orf65H3BRN8 121 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 SPINT2O43291 252 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 HKR1P10072 659 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 P2RX3P56373 397 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 STUMQ69YW2 141 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 ZNF561Q8N587 486 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 DRAM1Q8N682 238 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 OR4D5Q8NGN0 318 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 SDSLQ96GA7 329 aa12.46□□□□□ -0.42
TPM3-205ENST00000328159 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.45□□□□□ -0.42
TPM3-205ENST00000328159 CD3EP07766 207 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 GZMHP20718 246 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 VDAC1P21796 283 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 PPP1CCP36873 323 aaKnown RBP12.45□□□□□ -0.42
TPM3-205ENST00000328159 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
TPM3-205ENST00000328159 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 RFESDQ8TAC1 157 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 LINC01560Q8TB33 94 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 NEUROG1Q92886 237 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
TPM3-205ENST00000328159 ROS1P08922 2347 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 PIGBOS1A0A0B4J2F0 54 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 MEX3AA1L020 520 aaKnown RBP12.44□□□□□ -0.42
TPM3-205ENST00000328159 ANKRD34BA5PLL1 514 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 LRRC30A6NM36 301 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 E5RGE8 158 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 ST8SIA3O43173 380 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 ADAM20O43506 726 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 SERPINE2P07093 398 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 GRNP28799 593 aaKnown RBP12.44□□□□□ -0.42
TPM3-205ENST00000328159 RPL12P30050 165 aaKnown RBP12.44□□□□□ -0.42
TPM3-205ENST00000328159 HTD2P86397 168 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 CR1LQ2VPA4 569 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 FAM209AQ5JX71 171 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 TEX36Q5VZQ5 186 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 TGIF2LYQ8IUE0 185 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
TPM3-205ENST00000328159 ZBTB34Q8NCN2 500 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
TPM3-205ENST00000328159 EGLN1Q9GZT9 426 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms