RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PINX1Q96BK5 328 aaKnown RBP15.28■□□□□ 0.04
PRKCB-202ENST00000321728 AGMATQ9BSE5 352 aa15.28■□□□□ 0.04
PRKCB-202ENST00000321728 IL36RNQ9UBH0 155 aa15.28■□□□□ 0.04
PRKCB-202ENST00000321728 CD300LBA8K4G0 201 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 M0R143 59 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 PLA2G5P39877 138 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 OR6C1Q96RD1 312 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 TMEM38BQ9NVV0 291 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 ZNF391Q9UJN7 358 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 ARHGAP21Q5T5U3 1957 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 MUC3AQ02505 3323 aa15.27■□□□□ 0.04
PRKCB-202ENST00000321728 SCRG1O75711 98 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 SPANXN5Q5MJ07 72 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 HAPLN4Q86UW8 402 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 KMT5CQ86Y97 462 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 OR1K1Q8NGR3 316 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 OR2T10Q8NGZ9 312 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 MRPL30Q8TCC3 161 aaKnown RBP15.27■□□□□ 0.03
PRKCB-202ENST00000321728 RBM14Q96PK6 669 aaKnown RBP15.27■□□□□ 0.03
PRKCB-202ENST00000321728 OR4C12Q96R67 309 aa15.27■□□□□ 0.03
PRKCB-202ENST00000321728 A0A0J9YW62 118 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 UBE2L5PA0A1B0GUS4 154 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 B4E171 279 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 IFNL4K9M1U5 179 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 PIAS2O75928 621 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 CCKARP32238 428 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 TSPAN7P41732 249 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 PSMB3P49720 205 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 CLDN15P56746 228 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 ACTL10Q5JWF8 245 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 SMRP1Q8NCR6 262 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 OR5T1Q8NG75 326 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 WDR61Q9GZS3 305 aaKnown RBP15.26■□□□□ 0.03
PRKCB-202ENST00000321728 PARLQ9H300 379 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 DCAF16Q9NXF7 216 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 ATP23Q9Y6H3 246 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 CTXN2P0C2S0 81 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 GLB1P16278 677 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF25P17030 456 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-202ENST00000321728 RNPS1Q15287 305 aaKnown RBP15.26■□□□□ 0.03
PRKCB-202ENST00000321728 ACOT6Q3I5F7 207 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-202ENST00000321728 SLC25A45Q8N413 288 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 OR4F5Q8NH21 305 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 OR4F4Q96R69 305 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 SRXN1Q9BYN0 137 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 SEMA5BQ9P283 1151 aa15.26■□□□□ 0.03
PRKCB-202ENST00000321728 ERVFC1-1P60608 527 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 RPP25LQ8N5L8 163 aaKnown RBP15.25■□□□□ 0.03
PRKCB-202ENST00000321728 FGFBP3Q8TAT2 258 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF845Q96IR2 970 aaPredicted RBP15.25■□□□□ 0.03
PRKCB-202ENST00000321728 FSCN3Q9NQT6 498 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 FKBP11Q9NYL4 201 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 ERRFI1Q9UJM3 462 aaPredicted RBP15.25■□□□□ 0.03
PRKCB-202ENST00000321728 ACSF3Q4G176 576 aaPredicted RBP15.25■□□□□ 0.03
PRKCB-202ENST00000321728 TECTBQ96PL2 329 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 OR2H1Q9GZK4 316 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 SLC25A22Q9H936 323 aa15.25■□□□□ 0.03
PRKCB-202ENST00000321728 DKK1O94907 266 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 SLC25A6P12236 298 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 ZNF16P17020 682 aaPredicted RBP15.24■□□□□ 0.03
PRKCB-202ENST00000321728 NTF4P34130 210 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 OR8G2PQ6IF36 304 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.24■□□□□ 0.03
PRKCB-202ENST00000321728 OR10J5Q8NHC4 309 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 IL1F10Q8WWZ1 152 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 TAF15Q92804 592 aaKnown RBP eCLIP15.24■□□□□ 0.03
PRKCB-202ENST00000321728 WNT5BQ9H1J7 359 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 OR6C3Q9NZP0 311 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A10PA6NDY2 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A18PA6NE21 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A16PA6NEW6 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A20PA6NIJ5 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A8PA6NJQ4 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A7PA6NKC0 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A22PA8MWA6 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A12PA8MX19 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A5PA8MXJ8 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A23PA8MXZ1 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 IGKV1D-33P01593 117 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 IGKV1-33P01594 117 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A15PP0C7V4 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A13PP0C7W8 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A14PP0C7W9 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 FAM90A24PP0C7X0 464 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 EDN3P14138 238 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 GPM6AP51674 278 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 NXPH1P58417 271 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 SRSF7Q16629 238 aaKnown RBP eCLIP15.24■□□□□ 0.038e-14■■■■■ 44.3
PRKCB-202ENST00000321728 SYT13Q7L8C5 426 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 GATAD1Q8WUU5 269 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 PLA2G3Q9NZ20 509 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 OR2W1Q9Y3N9 320 aa15.24■□□□□ 0.03
PRKCB-202ENST00000321728 URB1O60287 2271 aaKnown RBP15.23■□□□□ 0.03
PRKCB-202ENST00000321728 ZIC3O60481 467 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 CCL3P10147 92 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 CNN1P51911 297 aaKnown RBP15.23■□□□□ 0.03
PRKCB-202ENST00000321728 CENPVQ7Z7K6 275 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-202ENST00000321728 GBGT1Q8N5D6 347 aa15.23■□□□□ 0.03
PRKCB-202ENST00000321728 C19orf25Q9UFG5 118 aaPredicted RBP15.23■□□□□ 0.03
PRKCB-202ENST00000321728 A0A1W2PR80 420 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms