RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 DOCK8Q8NF50 2099 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 A0A1B0GTH9 108 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 RHOVQ96L33 236 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 CHST5Q9GZS9 411 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 PPM1DO15297 605 aa14.82□□□□□ -0.04
SMCHD1-201ENST00000320876 LYZL6O75951 148 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 TMUB1Q9BVT8 246 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 ZNF324O75467 553 aaPredicted RBP14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 CKS2P33552 79 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 LINC01465Q8N7H1 131 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 OR8B3Q8NGG8 313 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 OR8B2Q96RD0 313 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 GHITMQ9H3K2 345 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 MPDU1O75352 247 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 MUC1P15941 1255 aaPredicted RBP14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 RAC3P60763 192 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 IBA57Q5T440 356 aaKnown RBP14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 OR1L8Q8NGR8 309 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 IGHV3-13P01766 116 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 IGHV3-7P01780 117 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 CCL2P13500 99 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 FOLR2P14207 255 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 RTP5Q14D33 572 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 C19orf54Q5BKX5 351 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 LYPD8Q6UX82 237 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 TRA2AQ13595 282 aaKnown RBP eCLIP14.81□□□□□ -0.048e-8■■□□□ 14.1
SMCHD1-201ENST00000320876 LYZL2Q7Z4W2 148 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 LSM10Q969L4 123 aaKnown RBP14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 CASP8AP2Q9UKL3 1982 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 PTPRDP23468 1912 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 TRBV9A0A0B4J1U6 114 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 ANKRD37Q7Z713 158 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 ADAMTSL3P82987 1691 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 SPTY2D1-AS1A0A0U1RR47 76 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 SHISA7A6NL88 538 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 SOCS1O15524 211 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 CD74P04233 296 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 ZNF735P0CB33 412 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 SLC25A34Q6PIV7 304 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 MUC15Q8N387 334 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 SLC52A3Q9NQ40 469 aa14.81□□□□□ -0.04
SMCHD1-201ENST00000320876 NUDT3O95989 172 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 PHF7Q9BWX1 381 aaPredicted RBP14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 GZMHP20718 246 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 PCP4P48539 62 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 SMAD4Q13485 552 aaKnown RBP14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 CA11O75493 328 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 SSPNQ14714 243 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 RCC1P18754 421 aaPredicted RBP14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 C1QTNF12Q5T7M4 302 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 C10orf126Q8N4M7 172 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 ALG14Q96F25 216 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 WFIKKN1Q96NZ8 548 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 P2RX4Q99571 388 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 ZDBF2Q9HCK1 2354 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 TMEM210A6NLX4 147 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 KBTBD11O94819 623 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 ATP6V0CP27449 155 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 EIF3IQ13347 325 aaKnown RBP14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 UBALD2Q8IYN6 164 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 AURKAIP1Q9NWT8 199 aaPredicted RBP14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 DMRT1Q9Y5R6 373 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 LEPROTL1O95214 131 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 MPLP40238 635 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 PGFP49763 221 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 A0A1W2PR80 420 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 RBFOX2O43251 390 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 PSG2P11465 335 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 SRD5A2P31213 254 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 HYAL1Q12794 435 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 PCOLCE2Q9UKZ9 415 aa14.8□□□□□ -0.04
SMCHD1-201ENST00000320876 DSPPQ9NZW4 1301 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 FAM157AC9JC47 383 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 HSPB1P04792 205 aaKnown RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 SLC25A40Q8TBP6 338 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 TRGC2P03986 189 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 NUDT16L1Q9BRJ7 211 aaKnown RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 PRSS23O95084 383 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 ZNF764Q96H86 408 aaPredicted RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 CDX4O14627 284 aaPredicted RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 FFAR1O14842 300 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 KCNAB3O43448 404 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 MAS1LP35410 378 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 OR4D9Q8NGE8 314 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 RAB1CQ92928 201 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 DNAL4O96015 105 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 BHLHA15Q7RTS1 189 aaPredicted RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 TMEM183AQ8IXX5 376 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 TMEM189A5PLL7 270 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 CTSVO60911 334 aa14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 F12P00748 615 aaPredicted RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 FAM53AQ6NSI3 398 aaPredicted RBP14.79□□□□□ -0.04
SMCHD1-201ENST00000320876 MRPL24Q96A35 216 aaKnown RBP14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 SF3B5Q9BWJ5 86 aaKnown RBP14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 DIRC2Q96SL1 478 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 MPZL1O95297 269 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 KLRB1Q12918 225 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 PIGYQ3MUY2 71 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 OR10AG1Q8NH19 301 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms