RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 SLC17A2O00624 439 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 WIPF1O43516 503 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 PSMB9P28065 219 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 EMX1Q04741 257 aaPredicted RBP12.82□□□□□ -0.36
HDDC2-201ENST00000318787 GNMTQ14749 295 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 SSX1Q16384 188 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 SVOPQ8N4V2 548 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 OR51D1Q8NGF3 324 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 OR52L2PQ8NGH6 319 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 IL1F10Q8WWZ1 152 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 OCSTAMPQ9BR26 566 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 MEGF8Q7Z7M0 2845 aa12.82□□□□□ -0.36
HDDC2-201ENST00000318787 TMEM14DPA8MWL7 114 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 GLAP06280 429 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 MYL9P24844 172 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 GABARAPL2P60520 117 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 KHDC1LQ5JSQ8 128 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 OR5AU1Q8NGC0 362 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 CFHR4Q92496 578 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 CITED2Q99967 270 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-201ENST00000318787 V9GY05 133 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 NCBP2LA6PVI3 153 aaKnown RBP12.81□□□□□ -0.36
HDDC2-201ENST00000318787 M0QZK8 103 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 SOCS1O15524 211 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 PPP1CCP36873 323 aaKnown RBP12.81□□□□□ -0.36
HDDC2-201ENST00000318787 VEGFCP49767 419 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 DEFA6Q01524 100 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 ZNF816Q0VGE8 651 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-201ENST00000318787 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 TGIF2LXQ8IUE1 241 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 RTN4IP1Q8WWV3 396 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-201ENST00000318787 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
HDDC2-201ENST00000318787 TM2D1Q9BX74 207 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 LPAR5Q9H1C0 372 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 ABRACLQ9P1F3 81 aa12.81□□□□□ -0.36
HDDC2-201ENST00000318787 SMIM30A4D0T7 59 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 PDCD5O14737 125 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 ZNF134P52741 427 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 OR10A3P58181 314 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 QRFPP83859 136 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 TMEM30BQ3MIR4 351 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 CT45A1Q5HYN5 189 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
HDDC2-201ENST00000318787 OR2W3Q7Z3T1 314 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 THNSL2Q86YJ6 484 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 GAPTQ8N292 157 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 LINC00311Q8N616 119 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 CT45A3Q8NHU0 189 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 GALMQ96C23 342 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 R3HDM4Q96D70 268 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 HDHD3Q9BSH5 251 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-201ENST00000318787 ABHD14AQ9BUJ0 271 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 WNT10AQ9GZT5 417 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 MBNL3Q9NUK0 354 aaKnown RBP12.8□□□□□ -0.36
HDDC2-201ENST00000318787 NDUFB11Q9NX14 153 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 AK3Q9UIJ7 227 aa12.8□□□□□ -0.36
HDDC2-201ENST00000318787 FAM90A9PA6NNJ1 464 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 KCNAB3O43448 404 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 AMY1AP04745 511 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 AMY2AP04746 511 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 MORN2Q502X0 79 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 JPT1Q9UK76 154 aa12.79□□□□□ -0.36
HDDC2-201ENST00000318787 RRP15Q9Y3B9 282 aaKnown RBP12.79□□□□□ -0.36
HDDC2-201ENST00000318787 ZNF736B4DX44 427 aaPredicted RBP12.78□□□□□ -0.36
HDDC2-201ENST00000318787 DENRO43583 198 aaKnown RBP12.78□□□□□ -0.36
HDDC2-201ENST00000318787 RGS11O94810 467 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 PSMD7P51665 324 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 C10orf99Q6UWK7 81 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 NDUFA11Q86Y39 141 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 SPARTQ8N0X7 666 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 C5orf56Q8N8D9 126 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 C8orf31Q8N9H6 132 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 OR4X2Q8NGF9 303 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 OR2T10Q8NGZ9 312 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 EAF1Q96JC9 268 aaPredicted RBP12.78□□□□□ -0.36
HDDC2-201ENST00000318787 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
HDDC2-201ENST00000318787 A0A075B6Q4 140 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 TMEM272A0A1B0GTI8 110 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 TCRBV4S1A1TA0A5B7 111 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 SERPINE3A8MV23 424 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 RAB3BP20337 219 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 MRPS15P82914 257 aaKnown RBP12.77□□□□□ -0.37
HDDC2-201ENST00000318787 PLA2G7Q13093 441 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 HMGN3Q15651 99 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 Q3ZCU0 254 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 OR2AK2Q8NG84 335 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.37
HDDC2-201ENST00000318787 NOL4LQ96MY1 436 aaPredicted RBP12.77□□□□□ -0.37
HDDC2-201ENST00000318787 VWFP04275 2813 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 A0A0B4J203 849 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 TRDV1A0A1B0GX56 115 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 SHISA3A0PJX4 238 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 PSMB11A5LHX3 300 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms