RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 FAM27BQ5VT28 67 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 ASCL4Q6XD76 172 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 ZNF100Q8IYN0 542 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 SIGLEC12Q96PQ1 595 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
CRAT-201ENST00000318080 SDF2L1Q9HCN8 221 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 CRIM1Q9NZV1 1036 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 PDCD6O75340 191 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 TCN2P20062 427 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 IDH3GP51553 393 aaPredicted RBP13.71□□□□□ -0.22
CRAT-201ENST00000318080 MALLQ13021 153 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 ZNF787Q6DD87 383 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 OR1F12Q8NHA8 337 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 PLPPR1Q8TBJ4 325 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 GATAD1Q8WUU5 269 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 C10orf35Q96D05 121 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.22
CRAT-201ENST00000318080 CFAP47Q6ZTR5 3102 aa13.71□□□□□ -0.22
CRAT-201ENST00000318080 IGHV5-10-1A0A0J9YXX1 117 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 CDX4O14627 284 aaPredicted RBP13.7□□□□□ -0.22
CRAT-201ENST00000318080 NUPR1O60356 82 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 CNN3Q15417 329 aaKnown RBP13.7□□□□□ -0.22
CRAT-201ENST00000318080 ZNF705AQ6ZN79 300 aaPredicted RBP13.7□□□□□ -0.22
CRAT-201ENST00000318080 SLC25A26Q70HW3 274 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 R3HDM4Q96D70 268 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 A0A0G2JRQ6 117 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 RND2P52198 227 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 UCP3P55916 312 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 RPS18P62269 152 aaKnown RBP13.7□□□□□ -0.22
CRAT-201ENST00000318080 TESK1Q15569 626 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 PLA2G2CQ5R387 149 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 PLCXD3Q63HM9 321 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 IL22RA1Q8N6P7 574 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 CCDC71LQ8N9Z2 235 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 ACTR3CQ9C0K3 210 aaPredicted RBP13.7□□□□□ -0.22
CRAT-201ENST00000318080 RBKSQ9H477 322 aa13.7□□□□□ -0.22
CRAT-201ENST00000318080 DFFBO76075 338 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 FGF5P12034 268 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 TDGF1P3P51864 188 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 RBM11P57052 281 aaKnown RBP13.69□□□□□ -0.22
CRAT-201ENST00000318080 PSG4Q00888 419 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 HERPUD1Q15011 391 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 KMT5CQ86Y97 462 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 CCDC74BQ96LY2 380 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 SMDT1Q9H4I9 107 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 PTPRZ1P23471 2315 aaPredicted RBP13.69□□□□□ -0.22
CRAT-201ENST00000318080 CDS2O95674 445 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 DEFA4P12838 97 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 PAX9P55771 341 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 TLE4Q04727 773 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 ABLIM2Q6H8Q1 611 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 LHFPL2Q6ZUX7 228 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 TMEM256Q8N2U0 113 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 CCL28Q9NRJ3 127 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 MRPS18CQ9Y3D5 142 aaKnown RBP13.69□□□□□ -0.22
CRAT-201ENST00000318080 PPIAL4AQ9Y536 164 aa13.69□□□□□ -0.22
CRAT-201ENST00000318080 BCL2P10415 239 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 IAPPP10997 89 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 RAB35Q15286 201 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 EXT1Q16394 746 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 TMEM42Q69YG0 159 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 ZNF611Q8N823 705 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 TMEM56Q96MV1 263 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 OCIAD1Q9NX40 245 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 DKKL1Q9UK85 242 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 POLR3KQ9Y2Y1 108 aaPredicted RBP13.68□□□□□ -0.22
CRAT-201ENST00000318080 TMEM56-RWDD3S4R434 201 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 LAMA5O15230 3695 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 IGHV3-9P01782 118 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 FAM3BP58499 235 aaPredicted RBP13.68□□□□□ -0.22
CRAT-201ENST00000318080 TCF15Q12870 199 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 SPTBN2O15020 2390 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 PCNX2A6NKB5 2137 aa13.68□□□□□ -0.22
CRAT-201ENST00000318080 TRBV24-1A0A075B6N3 115 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 hCG_38984A0A1B0GV85 526 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 LRRC3CA6NJW4 275 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 ZNF732B4DXR9 585 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 TFPI2P48307 235 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
CRAT-201ENST00000318080 ARL16Q0P5N6 197 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 ZNF295-AS1Q8N0V1 137 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 OR1K1Q8NGR3 316 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 EXTL1Q92935 676 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 TAAR3PQ9P1P4 343 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 IGKV1-6A0A0C4DH72 117 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 SLC22A20A6NK97 555 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 LOC400499M0QZD8 3231 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 PFN1P07737 140 aaKnown RBP13.67□□□□□ -0.22
CRAT-201ENST00000318080 LIFP15018 202 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 SELEP16581 610 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 ID3Q02535 119 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 CST9LP1Q5W188 147 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 BEND2Q8NDZ0 799 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 PRSS33Q8NF86 280 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 ADGRG7Q96K78 797 aa13.67□□□□□ -0.22
CRAT-201ENST00000318080 DIRC2Q96SL1 478 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms