RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 KCNG3Q8TAE7 436 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 EXTL1Q92935 676 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 FAM210BQ96KR6 192 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF391Q9UJN7 358 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 HSD17B6O14756 317 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 OR5H8P0DN80 308 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 OR3A1P47881 315 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 CAMLGP49069 296 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 UBE2KP61086 200 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 TBR1Q16650 682 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF343Q6P1L6 599 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF843Q8N446 348 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 FAM89BQ8N5H3 189 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 GVQW1Q8N7I0 195 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 OR4S1Q8NGB4 309 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 NUDT16L1Q9BRJ7 211 aaKnown RBP11.14□□□□□ -0.63
CPNE1-201ENST00000317677 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
CPNE1-201ENST00000317677 TMEM59Q9BXS4 323 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 GPR132Q9UNW8 380 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 KALRNO60229 2985 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 FAM230AA0A1W2PPH8 454 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 A0A1W2PPQ1 181 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 A0A1W2PR80 420 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 K7EPK0 472 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 SPRY1O43609 319 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-201ENST00000317677 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 C1QL1O75973 258 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 NRASP01111 189 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 CELA3BP08861 270 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 FCGR2CP31995 323 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 RBX1P62877 108 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 RTL6Q6ICC9 239 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 FAM71E2Q8N5Q1 922 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 OR56B2PQ8NGI1 322 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 OR51F2Q8NH61 342 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 SPSB1Q96BD6 273 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 SCGB3A2Q96PL1 93 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 SYT3Q9BQG1 590 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 CDH20Q9HBT6 801 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 TLN1Q9Y490 2541 aaKnown RBP11.14□□□□□ -0.63
CPNE1-201ENST00000317677 BSNQ9UPA5 3926 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 SVILO95425 2214 aa11.14□□□□□ -0.63
CPNE1-201ENST00000317677 CFAP46Q8IYW2 2715 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF462Q96JM2 2506 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
CPNE1-201ENST00000317677 TRBV24-1A0A075B6N3 115 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 IGKV1-12A0A0C4DH73 117 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 KIR2DL5BA0A0G2JN68 375 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 KIR2DL5BA0A0G2JPC4 375 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 LYZL6O75951 148 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 IGKV1D-12P01611 117 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 IFNA6P05013 189 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 CSN2P05814 226 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 CHRM2P08172 466 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 SERPINA2P20848 420 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 MTCP1P56278 107 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 TMEM33P57088 247 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 HERPUD1Q15011 391 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 IQCJQ1A5X6 159 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 DMRTA1Q5VZB9 504 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 CLEC18BQ6UXF7 455 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 SLC25A26Q70HW3 274 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 KIR2DL5AQ8N109 375 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 CNEP1R1Q8N9A8 125 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 NEK7Q8TDX7 302 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 OR10C1Q96KK4 312 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF581Q9P0T4 197 aa11.13□□□□□ -0.63
CPNE1-201ENST00000317677 BORCS7-ASMTA0A0B4J1R7 106 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ZNF816-ZNF321PA0A0X1KG74 233 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 SOX15O60248 233 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 TNFSF13O75888 250 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 HIST1H1DP16402 221 aaKnown RBP11.12□□□□□ -0.63
CPNE1-201ENST00000317677 CCKARP32238 428 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 CDKN1BP46527 198 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 PDLIM4P50479 330 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 TLE4Q04727 773 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 GABRA6Q16445 453 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ASCL4Q6XD76 172 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 Q6ZT83 130 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 C1orf87Q8N0U7 546 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 RPRMLQ8N4K4 120 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 OR10A7Q8NGE5 316 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 PIGCQ92535 297 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 TMEM230Q96A57 120 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 APOBEC3DQ96AK3 386 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 TM2D1Q9BX74 207 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
CPNE1-201ENST00000317677 ATMQ13315 3056 aa11.12□□□□□ -0.63
CPNE1-201ENST00000317677 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms