RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 GFI1Q99684 422 aa12.33□□□□□ -0.44
FOXR1-201ENST00000317011 FAM192AQ9GZU8 254 aa12.33□□□□□ -0.44
FOXR1-201ENST00000317011 RBM38Q9H0Z9 239 aaKnown RBP12.33□□□□□ -0.44
FOXR1-201ENST00000317011 MOB4Q9Y3A3 225 aa12.33□□□□□ -0.44
FOXR1-201ENST00000317011 H3BMQ9 156 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 FGF16O43320 207 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 OR7C1O76099 320 aaPredicted RBP12.32□□□□□ -0.44
FOXR1-201ENST00000317011 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 RAB3BP20337 219 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 Q3ZCU0 254 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 FOXB2Q5VYV0 432 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 GLT8D1Q68CQ7 371 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 ZNF497Q6ZNH5 498 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 C5orf56Q8N8D9 126 aa12.32□□□□□ -0.44
FOXR1-201ENST00000317011 MRPS24Q96EL2 167 aaKnown RBP12.32□□□□□ -0.44
FOXR1-201ENST00000317011 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
FOXR1-201ENST00000317011 SMIM31A0A1B0GVY4 71 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 A0A1W2PP11 408 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 CSTBP04080 98 aaKnown RBP12.31□□□□□ -0.44
FOXR1-201ENST00000317011 GTF2F2P13984 249 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 GPR176Q14439 515 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 SPCS2Q15005 226 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 TPRA1Q86W33 373 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 NR2C2APQ86WQ0 139 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 Q8N6K4 173 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 OR4X2Q8NGF9 303 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 OR56B4Q8NH76 319 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 BCL7BQ9BQE9 202 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 DCSTAMPQ9H295 470 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 PLGRKTQ9HBL7 147 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 AURKAIP1Q9NWT8 199 aaPredicted RBP12.31□□□□□ -0.44
FOXR1-201ENST00000317011 RSL24D1Q9UHA3 163 aaKnown RBP12.31□□□□□ -0.44
FOXR1-201ENST00000317011 V9GY05 133 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
FOXR1-201ENST00000317011 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 SLC22A1O15245 554 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 IGHG2P01859 326 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
FOXR1-201ENST00000317011 IGLL1P15814 213 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 SERPINA2P20848 420 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 RPS19P39019 145 aaKnown RBP12.3□□□□□ -0.44
FOXR1-201ENST00000317011 HES5Q5TA89 166 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 ARL11Q969Q4 196 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 PLSCR3Q9NRY6 295 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
FOXR1-201ENST00000317011 MRPS28Q9Y2Q9 187 aaKnown RBP12.3□□□□□ -0.44
FOXR1-201ENST00000317011 IGHV1-3A0A0C4DH29 117 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 A0A1W2PPE3 182 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 GLAP06280 429 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 TMEM11P17152 192 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 CD33P20138 364 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 GNG10P50151 68 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 ZNF137PP52743 207 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 CLDN12P56749 244 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 P2RY14Q15391 338 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 RAB11BQ15907 218 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 LTC4SQ16873 150 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 AWAT2Q6E213 333 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
FOXR1-201ENST00000317011 ZNF439Q8NDP4 499 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 OR6M1Q8NGM8 313 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 OR10X1Q8NGY0 326 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 RCC1LQ96I51 464 aaKnown RBP12.29□□□□□ -0.44
FOXR1-201ENST00000317011 EAF1Q96JC9 268 aaPredicted RBP12.29□□□□□ -0.44
FOXR1-201ENST00000317011 S100A13Q99584 98 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 UQCC2Q9BRT2 126 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 NDUFA13Q9P0J0 144 aa12.29□□□□□ -0.44
FOXR1-201ENST00000317011 PSMB11A5LHX3 300 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 FAM90A10PA6NDY2 464 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 FAM90A7PA6NKC0 464 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 NOTOA8MTQ0 251 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 FAM90A23PA8MXZ1 464 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 SLC17A2O00624 439 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 IGKV1D-33P01593 117 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 IGKV1-33P01594 117 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 CD37P11049 281 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
FOXR1-201ENST00000317011 HTR2CP28335 458 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 CD1BP29016 333 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 PSMD7P51665 324 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 ZNF134P52741 427 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 HNF4GQ14541 408 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 C9orf152Q5JTZ5 239 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 C1orf100Q5SVJ3 147 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 ATAD3CQ5T2N8 411 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 STEAP3Q658P3 488 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 SFXN4Q6P4A7 337 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 GLIPR1L1Q6UWM5 242 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 ZNF329Q86UD4 541 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 IZUMO1Q8IYV9 350 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
FOXR1-201ENST00000317011 KCNK15Q9H427 330 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms