RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 H0YL77 283 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 AGAP20933 346 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 KRBOX4Q5JUW0 171 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 STX12Q86Y82 276 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 Q8IYB0 196 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 OR1J1Q8NGS3 322 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 SLC25A40Q8TBP6 338 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 GMPPAQ96IJ6 420 aaPredicted RBP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 C12orf57Q99622 126 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 KCNS2Q9ULS6 477 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 POLDIP2Q9Y2S7 368 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 CDIPTO14735 213 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 NXPH2O95156 264 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 IAPPP10997 89 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 RAB5AP20339 215 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 SNRPEP62304 92 aaKnown RBP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 ARL16Q0P5N6 197 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 ZNF146Q15072 292 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 HAPLN4Q86UW8 402 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 WIPI2Q9Y4P8 454 aa12.85□□□□□ -0.35
SPIRE1-201ENST00000309836 A0A1W2PPE3 182 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 IQCF6A8MYZ5 107 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 LYZL6O75951 148 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 DFFBO76075 338 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 SCAF4O95104 1147 aaKnown RBP12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 CNOT4O95628 575 aaKnown RBP12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 SELEP16581 610 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 MPV17P39210 176 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 DPPA3Q6W0C5 159 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 THNSL2Q86YJ6 484 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 NCOR1O75376 2440 aa12.84□□□□□ -0.35
SPIRE1-201ENST00000309836 PIGBOS1A0A0B4J2F0 54 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 SYNGR2O43760 224 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 EIF3GO75821 320 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 FBP1P09467 338 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 RAC2P15153 192 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 PSG7Q13046 419 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 GCNT2Q8N0V5 402 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 ZNF561Q8N587 486 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 DRAM1Q8N682 238 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 TMEM178AQ8NBL3 297 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 WSB1Q9Y6I7 421 aa12.83□□□□□ -0.36
SPIRE1-201ENST00000309836 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 H3BQ15 152 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 SH2D1BO14796 132 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 WISP2O76076 250 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 IFNA5P01569 189 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 GRPP07492 148 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 ZNF16P17020 682 aaPredicted RBP12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 MAS1LP35410 378 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 CEACAM6P40199 344 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 GABRA6Q16445 453 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 ZNF525Q8N782 197 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 HES4Q9HCC6 221 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 LIN7CQ9NUP9 197 aaKnown RBP12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 PSENENQ9NZ42 101 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 HAND1O96004 215 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 MEOX2P50222 304 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 TNFSF10P50591 281 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 HOXA4Q00056 320 aaPredicted RBP12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 OR1L1Q8NH94 360 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 MALSU1Q96EH3 234 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 RBM7Q9Y580 266 aaKnown RBP12.82□□□□□ -0.36
SPIRE1-201ENST00000309836 TRAV1-1A0A0B4J248 108 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 WNT9BO14905 357 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 PSPNO60542 156 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 WDR1O75083 606 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 HSPB1P04792 205 aaKnown RBP12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 METTL15P1P0C7V9 234 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 TLE4Q04727 773 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 GUSBP1Q15486 140 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 EIF2S3LQ2VIR3 472 aaKnown RBP12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 VSIRQ9H7M9 311 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 OR14J1Q9UGF5 321 aa12.81□□□□□ -0.36
SPIRE1-201ENST00000309836 TINAGQ9UJW2 476 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms