RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TRAPPC2LQ9UL33 140 aa15.7■□□□□ 0.1
PDZRN3-202ENST00000308537 IGHV3-72A0A0B4J1Y9 119 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 FOXI3A8MTJ6 420 aaPredicted RBP15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 ZNF736B4DX44 427 aaPredicted RBP15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 H3BUI4 141 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 CCRL2O00421 344 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 GAPDHP04406 335 aaKnown RBP15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 CPEP16870 476 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 MAP2K4P45985 399 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 GNMTQ14749 295 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 TMEM30BQ3MIR4 351 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 ARSJQ5FYB0 599 aaPredicted RBP15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 C6orf183Q5T699 404 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 GLT8D1Q68CQ7 371 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 ZNF554Q86TJ5 538 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 EAF1Q96JC9 268 aaPredicted RBP15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 TAF9BQ9HBM6 251 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 PLSCR3Q9NRY6 295 aa15.69■□□□□ 0.1
PDZRN3-202ENST00000308537 PEX14O75381 377 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 TMEM11P17152 192 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 HNF4GQ14541 408 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 C6orf201Q7Z4U5 140 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 ODF3L1Q8IXM7 274 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 OR10V1Q8NGI7 309 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 R3HDM4Q96D70 268 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 LPAR5Q9H1C0 372 aa15.68■□□□□ 0.1
PDZRN3-202ENST00000308537 LINC01548A6NM66 108 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 SPINT2O43291 252 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 NAPSAO96009 420 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 IGHG2P01859 326 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 FABP5Q01469 135 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 HES1Q14469 280 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 SSX1Q16384 188 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 MORN2Q502X0 79 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 STEAP3Q658P3 488 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 ZNF880Q6PDB4 577 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 TRAT1Q6PIZ9 186 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 CENPVQ7Z7K6 275 aaPredicted RBP15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 WFDC9Q8NEX5 89 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 OR6M1Q8NGM8 313 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 MGLLQ99685 303 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 TMEM59Q9BXS4 323 aa15.67■□□□□ 0.1
PDZRN3-202ENST00000308537 SLC17A2O00624 439 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 BPNT1O95861 308 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 HSMCR30P0CW71 290 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 HMGN3Q15651 99 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 TBCEQ15813 527 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 NKAPLQ5M9Q1 402 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 MOB3BQ86TA1 216 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 PRR18Q8N4B5 295 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 FAM89BQ8N5H3 189 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 Q8N9W7 124 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 OR4F17Q8NGA8 305 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 OR52L2PQ8NGH6 319 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 KCNG3Q8TAE7 436 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 NOL4LQ96MY1 436 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 OR4F4Q96R69 305 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 FAAP24Q9BTP7 215 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 GNG12Q9UBI6 72 aa15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 AK6Q9Y3D8 172 aaKnown RBP15.66■□□□□ 0.1
PDZRN3-202ENST00000308537 SHISA3A0PJX4 238 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 CD1BP29016 333 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 HTD2P86397 168 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 TRAM1Q15629 374 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 OXLD1Q5BKU9 147 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 C9orf152Q5JTZ5 239 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 LY6G6FQ5SQ64 297 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 SVOPQ8N4V2 548 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 JPT1Q9UK76 154 aa15.65■□□□□ 0.1
PDZRN3-202ENST00000308537 A0A1W2PRX2 142 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 LDLRAD4O15165 306 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 SOCS1O15524 211 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 DENRO43583 198 aaKnown RBP15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 MRPS14O60783 128 aaKnown RBP15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 PPP1CCP36873 323 aaKnown RBP15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 TMEM50BP56557 158 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 ZNF329Q86UD4 541 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 TGIF2LXQ8IUE1 241 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 YTHDF1Q9BYJ9 559 aaKnown RBP15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 OR2S2Q9NQN1 319 aa15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 TSSC4Q9Y5U2 329 aaPredicted RBP15.64■□□□□ 0.09
PDZRN3-202ENST00000308537 TCRBV4S1A1TA0A5B7 111 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 LANCL1O43813 399 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 YPEL1O60688 119 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 PSMA1P25786 263 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 PLA2G7Q13093 441 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 P2RY14Q15391 338 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 ETV3LQ6ZN32 361 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 OR2W3Q7Z3T1 314 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 FAM71E2Q8N5Q1 922 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 OR2T10Q8NGZ9 312 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 NEDD4LQ96PU5 975 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 YPEL2Q96QA6 119 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 ABCG5Q9H222 651 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 RAB9BQ9NP90 201 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 ACOT13Q9NPJ3 140 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 LINC00527Q9UJ94 153 aa15.63■□□□□ 0.09
PDZRN3-202ENST00000308537 TRBV6-6A0A0A6YYG2 114 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 PSMB11A5LHX3 300 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 TXNL1O43396 289 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms