RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PLP2Q04941 152 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 METTL1Q9UBP6 276 aaKnown RBP12.51□□□□□ -0.41
PTPN9-201ENST00000306726 CLN8Q9UBY8 286 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 STRAPQ9Y3F4 350 aaKnown RBP12.51□□□□□ -0.41
PTPN9-201ENST00000306726 UBE2CO00762 179 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 GFRA3O60609 400 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 CD82P27701 267 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 FAM185AQ8N0U4 392 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 MAP1LC3B2A6NCE7 125 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 NCR3LG1Q68D85 454 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 MAP1LC3BQ9GZQ8 125 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 GCM1Q9NP62 436 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 HDGFL3Q9Y3E1 203 aa12.51□□□□□ -0.41
PTPN9-201ENST00000306726 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 NTF4P34130 210 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 RBKSQ9H477 322 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 A0A0G2JRQ6 117 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 PRF1P14222 555 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 AGAP20933 346 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
PTPN9-201ENST00000306726 THBS3P49746 956 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 ZP4Q12836 540 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
PTPN9-201ENST00000306726 DCAF12Q5T6F0 453 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 DEFB124Q8NES8 71 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 OR13D1Q8NGV5 346 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 DEFB127Q9H1M4 99 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
PTPN9-201ENST00000306726 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 DEGS1O15121 323 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 CELA3AP09093 270 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 PRSS8Q16651 343 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 CBLN4Q9NTU7 201 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 TNCP24821 2201 aa12.5□□□□□ -0.41
PTPN9-201ENST00000306726 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 ZNF737O75373 536 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 NXPH2O95156 264 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 RAB1AP62820 205 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 CTAG1AP78358 180 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 TUSC5Q8IXB3 177 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 LOXL2Q9Y4K0 774 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 TRDCB7Z8K6 153 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 CLDN34H7C241 214 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 RHBDL1O75783 438 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 SRP19P09132 144 aaKnown RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 FTH1P19P0C7X4 201 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 COL8A2P25067 703 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 GABRA2P47869 451 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 SUCLG1P53597 346 aaKnown RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 IL13RA2Q14627 380 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 ELOBQ15370 118 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 IL2RGP31785 369 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 G6PCP35575 357 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 TGIF2LXQ8IUE1 241 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 GPR146Q96CH1 333 aa12.49□□□□□ -0.41
PTPN9-201ENST00000306726 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
PTPN9-201ENST00000306726 ARG2P78540 354 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 LHFPL2Q6ZUX7 228 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 OR51G1Q8NGK1 321 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 OBP2BQ9NPH6 170 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 TREM2Q9NZC2 230 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 LILRA1O75019 489 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 CEACAM6P40199 344 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 P2RY6Q15077 328 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 C16orf82Q7Z2V1 217 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 V9GYS6 101 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 PAGE4O60829 102 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 FOLR3P41439 243 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 FUT6P51993 359 aa12.48□□□□□ -0.41
PTPN9-201ENST00000306726 SELENOHQ8IZQ5 122 aaKnown RBP12.48□□□□□ -0.41
PTPN9-201ENST00000306726 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 ACTL6BO94805 426 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 HSPB1P04792 205 aaKnown RBP12.47□□□□□ -0.41
PTPN9-201ENST00000306726 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
PTPN9-201ENST00000306726 ICAM4Q14773 271 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 ZNF826PQ6ZT77 177 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 DMRTC2Q8IXT2 367 aaPredicted RBP12.47□□□□□ -0.41
PTPN9-201ENST00000306726 CNEP1R1Q8N9A8 125 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 MUCL1Q96DR8 90 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 TMEM222Q9H0R3 208 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 Q9N2K0 584 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms