RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 PRRX1P54821 245 aa18.14■□□□□ 0.5
HOXD4-201ENST00000306324 TMEM30BQ3MIR4 351 aa18.14■□□□□ 0.5
HOXD4-201ENST00000306324 OR52L2PQ8NGH6 319 aa18.14■□□□□ 0.5
HOXD4-201ENST00000306324 ST6GALNAC5Q9BVH7 336 aa18.14■□□□□ 0.5
HOXD4-201ENST00000306324 ZNRD1Q9P1U0 126 aa18.14■□□□□ 0.5
HOXD4-201ENST00000306324 A0A1W2PPE3 182 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 TRDCB7Z8K6 153 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 J3QR06 171 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 SSX5O60225 188 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 IGLV1-47P01700 117 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 MELTFP08582 738 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 DTYMKP23919 212 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 HTD2P86397 168 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 GNMTQ14749 295 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 FOXB2Q5VYV0 432 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 LAX1Q8IWV1 398 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 OR4P4Q8NGL7 312 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 MCFD2Q8NI22 146 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 MIXL1Q9H2W2 232 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 EXTL2Q9UBQ6 330 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 JPT1Q9UK76 154 aa18.14■□□□□ 0.49
HOXD4-201ENST00000306324 TBL2Q9Y4P3 447 aaKnown RBP18.14■□□□□ 0.49
HOXD4-201ENST00000306324 PAX6P26367 422 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 HTR1DP28221 377 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 KIR2DS4P43632 304 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 KIR2DS1Q14954 304 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 HLA-DRB5Q30154 266 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 BEND2Q8NDZ0 799 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 MMP28Q9H239 520 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 ADAM30Q9UKF2 790 aa18.13■□□□□ 0.49
HOXD4-201ENST00000306324 FABP7O15540 132 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 TCF21O43680 179 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 PPP1CCP36873 323 aaKnown RBP18.12■□□□□ 0.49
HOXD4-201ENST00000306324 TUSC1Q2TAM9 212 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 LDLRAD2Q5SZI1 272 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 GCDHQ92947 438 aaPredicted RBP18.12■□□□□ 0.49
HOXD4-201ENST00000306324 AJUBAQ96IF1 538 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 SLC23A1Q9UHI7 598 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 HILPDAQ9Y5L2 63 aa18.12■□□□□ 0.49
HOXD4-201ENST00000306324 HSPA12AO43301 675 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 GSTT2P0CG29 244 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 GSTT2BP0CG30 244 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 BAMBIQ13145 260 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 SSX2Q16385 188 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 MORN2Q502X0 79 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 MINOS1Q5TGZ0 78 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 STEAP3Q658P3 488 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 PRIMA1Q86XR5 153 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 SNX29P2Q8IUI4 249 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 OR4A4PQ8NGN8 299 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 OR10X1Q8NGY0 326 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 MINOS1-NBL1R4GNA1 71 aa18.11■□□□□ 0.49
HOXD4-201ENST00000306324 IGKV1D-8A0A087WSZ0 117 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 MEIS3P1A6NDR6 274 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 BUB1B-PAK6H3BSN5 160 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 RGS11O94810 467 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 HLA-DQB1P01920 261 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 SRSF7Q16629 238 aaKnown RBP eCLIP18.1■□□□□ 0.49
HOXD4-201ENST00000306324 CNIH2Q6PI25 160 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 Q6YL49 198 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 MALSU1Q96EH3 234 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 NXF2Q9GZY0 626 aaKnown RBP18.1■□□□□ 0.49
HOXD4-201ENST00000306324 PRDM13Q9H4Q3 707 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 OR1A1Q9P1Q5 309 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 DPM3Q9P2X0 92 aa18.1■□□□□ 0.49
HOXD4-201ENST00000306324 AMMECR1Q9Y4X0 333 aaPredicted RBP18.1■□□□□ 0.49
HOXD4-201ENST00000306324 LEUTXA8MZ59 168 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 BET1O15155 118 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 SLC31A2O15432 143 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 YPEL1O60688 119 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 FCER2P06734 321 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 ZBTB25P24278 435 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 PRSS3P35030 304 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 HILS1P60008 231 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 HERPUD1Q15011 391 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 Q3ZCU0 254 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 PLA1AQ53H76 456 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 IGSF11Q5DX21 431 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 Q6ZS49 121 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 DYNAPQ8N1N2 210 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 GVQW1Q8N7I0 195 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 CREB3L1Q96BA8 519 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 DUX5Q96PT3 197 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 YPEL2Q96QA6 119 aa18.09■□□□□ 0.49
HOXD4-201ENST00000306324 IGKV1-6A0A0C4DH72 117 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 HOXA3O43365 443 aaPredicted RBP18.08■□□□□ 0.49
HOXD4-201ENST00000306324 CEACAM3P40198 252 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 CEACAM6P40199 344 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 ZNF134P52741 427 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 RIPPLY3P57055 190 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 SRSF2Q01130 221 aaKnown RBP18.08■□□□□ 0.49
HOXD4-201ENST00000306324 C8orf31Q8N9H6 132 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 ZNF439Q8NDP4 499 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 DIRAS2Q96HU8 199 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 JMJD8Q96S16 334 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 OCSTAMPQ9BR26 566 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 ESM1Q9NQ30 184 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 TNFRSF19Q9NS68 423 aa18.08■□□□□ 0.49
HOXD4-201ENST00000306324 A0A0A6YYJ9 748 aa18.07■□□□□ 0.48
HOXD4-201ENST00000306324 CBX5P45973 191 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms