RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FAM90A20PA6NIJ5 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A8PA6NJQ4 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A7PA6NKC0 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A22PA8MWA6 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A12PA8MX19 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A5PA8MXJ8 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A23PA8MXZ1 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 RAB29O14966 203 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A15PP0C7V4 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A13PP0C7W8 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A14PP0C7W9 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 FAM90A24PP0C7X0 464 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 VSIG10L2P0DP72 767 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 PRSS50Q9UI38 385 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 A0A1W2PP11 408 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 PTTG1IPP53801 180 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 B2MP61769 119 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 MARS2Q96GW9 593 aaKnown RBP13.81□□□□□ -0.2
USP42-201ENST00000306177 J3QR89 54 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 HPRT1P00492 218 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 CCL8P80075 99 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 TEPPQ6URK8 271 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 MRGPRGQ86SM5 289 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 DOLPP1Q86YN1 238 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 WNT2BQ93097 391 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 SPSB2Q99619 263 aa13.81□□□□□ -0.2
USP42-201ENST00000306177 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 B4DEV8 164 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 C11orf42Q8N5U0 333 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 OR10G8Q8NGN5 311 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 OR2T10Q8NGZ9 312 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 ASCL3Q9NQ33 180 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 FAM206AQ9NX38 181 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 J3QR06 171 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 IGKV3-11P04433 115 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 HOXB1P14653 301 aaPredicted RBP13.8□□□□□ -0.2
USP42-201ENST00000306177 OR1K1Q8NGR3 316 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 PRSS3P2Q8NHM4 247 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 ANKRD55Q3KP44 614 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 C10orf113Q5VZT2 155 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 Q8WTZ3 238 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 TMUB1Q9BVT8 246 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 CACNA1EQ15878 2313 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 K7N7A8 449 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 PITX3O75364 302 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 AMTP48728 403 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 ERVS71-1P61550 626 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 IGSF11Q5DX21 431 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 OR4X1Q8NH49 305 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 PERPQ96FX8 193 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 OR2V2Q96R30 315 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 PARD6AQ9NPB6 346 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 CLEC5AQ9NY25 188 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 NAGKQ9UJ70 344 aa13.8□□□□□ -0.2
USP42-201ENST00000306177 TGIF1Q15583 401 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 CCDC144NLQ6NUI1 221 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 OR5R1Q8NH85 324 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 DPF1Q92782 380 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 CTXND1A0A1B0GTU2 59 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 PDE6DO43924 150 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 IGHMP01871 453 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
USP42-201ENST00000306177 CAMPP49913 170 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 STXBP6Q8NFX7 210 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 ZNF714Q96N38 554 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 OR51B2Q9Y5P1 312 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 RALGAPA2Q2PPJ7 1873 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 A0A1W2PPE3 182 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 LINC00862A6NCI5 91 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 F5H697 171 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 TIAF1O95411 115 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 OR2H2O95918 312 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 OR1L1Q8NH94 360 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 GHITMQ9H3K2 345 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 PSME4Q14997 1843 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 DHRS7CA6NNS2 312 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 HBZP02008 142 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 DAOP14920 347 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 ATP6V0CP27449 155 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 FAM74A3Q4VXF1 159 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 DPPA3Q6W0C5 159 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 SLC25A38Q96DW6 304 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 KCNMB2Q9Y691 235 aa13.79□□□□□ -0.2
USP42-201ENST00000306177 H0Y980 276 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 MMDQ15546 238 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 TMEM171Q8WVE6 324 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 CCL13Q99616 98 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 LMX1BO60663 402 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 CXorf1O96002 111 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 COX19Q49B96 90 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 CDCP2Q5VXM1 449 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 MS4A10Q96PG2 267 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 LCTP09848 1927 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 PAGE4O60829 102 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 AQP3Q92482 292 aa13.78□□□□□ -0.2
USP42-201ENST00000306177 PKIBQ9C010 78 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms