RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 LTC4SQ16873 150 aa10.77□□□□□ -0.69
CCDC7-202ENST00000302316 CR1LQ2VPA4 569 aa10.77□□□□□ -0.69
CCDC7-202ENST00000302316 ZNF818PQ6ZRF7 136 aa10.77□□□□□ -0.69
CCDC7-202ENST00000302316 TIMD4Q96H15 378 aa10.77□□□□□ -0.69
CCDC7-202ENST00000302316 ZNF436Q9C0F3 470 aaPredicted RBP10.77□□□□□ -0.69
CCDC7-202ENST00000302316 PARP12Q9H0J9 701 aaKnown RBP10.77□□□□□ -0.69
CCDC7-202ENST00000302316 OR2S2Q9NQN1 319 aa10.77□□□□□ -0.69
CCDC7-202ENST00000302316 CCL28Q9NRJ3 127 aa10.77□□□□□ -0.69
CCDC7-202ENST00000302316 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.69
CCDC7-202ENST00000302316 IGHV3-43A0A0B4J1X8 118 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 GPR31O00270 319 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 DVL1O14640 695 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 PPIHO43447 177 aaKnown RBP10.76□□□□□ -0.69
CCDC7-202ENST00000302316 SLC22A5O76082 557 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 FSTL3O95633 263 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 CLDN1O95832 211 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 IGHV3-43DP0DP04 118 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 PPP1CCP36873 323 aaKnown RBP10.76□□□□□ -0.69
CCDC7-202ENST00000302316 HTD2P86397 168 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 C2orf68Q2NKX9 166 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 ZFP69Q49AA0 526 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 LDLRAD3Q86YD5 345 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 COQ8AQ8NI60 647 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 NAA60Q9H7X0 242 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 RAB9BQ9NP90 201 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 FCN3O75636 299 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 IFNA2P01563 188 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 COX6B1P14854 86 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 FAM53AQ6NSI3 398 aaPredicted RBP10.76□□□□□ -0.69
CCDC7-202ENST00000302316 FAM185AQ8N0U4 392 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 H1FXQ92522 213 aaKnown RBP10.76□□□□□ -0.69
CCDC7-202ENST00000302316 RAB1CQ92928 201 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 CHIAQ9BZP6 476 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 PLEKHF2Q9H8W4 249 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 CHODLQ9H9P2 273 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 C19orf12Q9NSK7 152 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 PRR13Q9NZ81 148 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 GNG12Q9UBI6 72 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 KCNS2Q9ULS6 477 aa10.76□□□□□ -0.69
CCDC7-202ENST00000302316 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 KBTBD11-OT1A0A1B0GTJ5 212 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 NDUFS7O75251 213 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 SIX6O95475 246 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 OR8U9P0C7N5 309 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 OMGP23515 440 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 RPL31P62899 125 aaKnown RBP10.75□□□□□ -0.69
CCDC7-202ENST00000302316 CMTM1Q8IZ96 169 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 OR8U1Q8NH10 309 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 CLN8Q9UBY8 286 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 JPT1Q9UK76 154 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 KCNIP3Q9Y2W7 256 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 LINC00312Q9Y6C7 94 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 ZNF729A6NN14 1252 aaPredicted RBP10.75□□□□□ -0.69
CCDC7-202ENST00000302316 SMLR1H3BR10 107 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 F2RL2O00254 374 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 F12P00748 615 aaPredicted RBP10.75□□□□□ -0.69
CCDC7-202ENST00000302316 CGB3P0DN86 165 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 CGB7P0DN87 165 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 EFNA4P52798 201 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 MEF2CQ06413 473 aaPredicted RBP10.75□□□□□ -0.69
CCDC7-202ENST00000302316 C17orf58Q2M2W7 97 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 NLRC3Q7RTR2 1065 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 CORO2AQ92828 525 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 TOLLIPQ9H0E2 274 aa10.75□□□□□ -0.69
CCDC7-202ENST00000302316 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 CCSO14618 274 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 MPPED1O15442 326 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 TNFSF12O43508 249 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 GIPP09681 153 aaPredicted RBP10.74□□□□□ -0.69
CCDC7-202ENST00000302316 OR5AC1P0C628 307 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 S100GP29377 79 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 H2BFSP57053 126 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 RND3P61587 244 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 DCAF12L2Q5VW00 463 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 TBC1D26Q86UD7 250 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 GALNT14Q96FL9 552 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 CCL19Q99731 98 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 LPAR3Q9UBY5 353 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 SHPKQ9UHJ6 478 aa10.74□□□□□ -0.69
CCDC7-202ENST00000302316 UBE2J1Q9Y385 318 aaPredicted RBP10.74□□□□□ -0.69
CCDC7-202ENST00000302316 OVOL3O00110 214 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 PHF1O43189 567 aaPredicted RBP10.73□□□□□ -0.69
CCDC7-202ENST00000302316 PLA2G2AP14555 144 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 NKX2-5P52952 324 aaPredicted RBP10.73□□□□□ -0.69
CCDC7-202ENST00000302316 TMEM33P57088 247 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 ZNF273Q14593 569 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 SP6Q3SY56 376 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 SP5Q6BEB4 398 aaPredicted RBP10.73□□□□□ -0.69
CCDC7-202ENST00000302316 BVESQ8NE79 360 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 GPHA2Q96T91 129 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 OR2D2Q9H210 308 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 GAL3ST2Q9H3Q3 398 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 DSCAML1Q8TD84 2053 aa10.73□□□□□ -0.69
CCDC7-202ENST00000302316 C3orf85A0A1B0GTC6 90 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms