RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 NAA60Q9H7X0 242 aa6.14□□□□□ -1.43
RAG1-201ENST00000299440 ZNF207O43670 478 aaKnown RBP6.14□□□□□ -1.43
RAG1-201ENST00000299440 CD33P20138 364 aa6.14□□□□□ -1.43
RAG1-201ENST00000299440 S100A11P31949 105 aa6.14□□□□□ -1.43
RAG1-201ENST00000299440 FXYD3Q14802 87 aa6.14□□□□□ -1.43
RAG1-201ENST00000299440 CELF2-AS1Q8N7Q2 184 aa6.14□□□□□ -1.43
RAG1-201ENST00000299440 WDYHV1Q96HA8 205 aa6.14□□□□□ -1.43
RAG1-201ENST00000299440 PTP4A3O75365 173 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 C1QL1O75973 258 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 S100A8P05109 93 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 BTG1P62324 171 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 ZFP36L1Q07352 338 aaKnown RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 RIPPLY2Q5TAB7 128 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 FA2HQ7L5A8 372 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 MYPOPQ86VE0 399 aaPredicted RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 CALHM1Q8IU99 346 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 SOSTQ9BQB4 213 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 HDHD3Q9BSH5 251 aaPredicted RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 REPIN1Q9BWE0 567 aaKnown RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 PRSS22Q9GZN4 317 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 CHCHD2Q9Y6H1 151 aaPredicted RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 S4R3C0 116 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 TDRD15B5MCY1 1934 aaKnown RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 ODAMA1E959 279 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 FAM24AA6NFZ4 105 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 RNF223E7ERA6 249 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 TMUB2Q71RG4 321 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 PRR13Q9NZ81 148 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 FRRS1LQ9P0K9 344 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 TMED3Q9Y3Q3 217 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 C4orf51C9J302 202 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 GATCO43716 136 aaKnown RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 TIAL1Q01085 375 aaKnown RBP eCLIP6.13□□□□□ -1.43
RAG1-201ENST00000299440 C3orf36Q3SXR2 165 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 PRR30Q53SZ7 412 aaPredicted RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 SCARB1Q8WTV0 552 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 EEF1AKMT3Q96AZ1 226 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 MEGF10Q96KG7 1140 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 RAB40CQ96S21 281 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 HIGD1AQ9Y241 93 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 IGHV3-66A0A0C4DH42 116 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 RPL36A-HNRNPH2H7BZ11 118 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 NUTF2P61970 127 aaKnown RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 FAM78BQ5VT40 261 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 GBGT1Q8N5D6 347 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 OR5C1Q8NGR4 320 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 ADAT3Q96EY9 351 aaPredicted RBP6.13□□□□□ -1.43
RAG1-201ENST00000299440 BTF3L4Q96K17 158 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 ANXA10Q9UJ72 324 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 NINQ8N4C6 2090 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 ATAD5Q96QE3 1844 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 ABCA4P78363 2273 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 TAAR5O14804 337 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 RGS13O14921 159 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 IGKV1D-33P01593 117 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 IGKV1-33P01594 117 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 IGHV1-2P23083 117 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 DSCR9P59020 149 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 FABP9Q0Z7S8 132 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 SNAI3Q3KNW1 292 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 SLC51BQ86UW2 128 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 APCDD1LQ8NCL9 501 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 LFNGQ8NES3 379 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 ZNF426Q9BUY5 554 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 OR2W1Q9Y3N9 320 aa6.13□□□□□ -1.43
RAG1-201ENST00000299440 IGHV2OR16-5A0A0B4J2B6 119 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 MED19A0JLT2 244 aaPredicted RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 ZNF701M0R085 212 aaPredicted RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 BMPR1BO00238 502 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 CTAG2O75638 210 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 NEURL1O76050 574 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 NPY1RP25929 384 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 RELBQ01201 579 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 Q5PR19 223 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 RPUSD3Q6P087 351 aaKnown RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 MMD2Q8IY49 270 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 ZNF561Q8N587 486 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 FAM216BQ8N7L0 139 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 FBXL17Q9UF56 701 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 PSG2P11465 335 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 ZNF708P17019 499 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 MMP15P51511 669 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 RBM11P57052 281 aaKnown RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 SNRPD3P62318 126 aaKnown RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 ZP4Q12836 540 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 ENDOGQ14249 297 aaKnown RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 PSG5Q15238 335 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 TMEM78Q5T7P6 136 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 LINC00596Q86U02 117 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 GTSCR1Q86UQ5 136 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 PXT1Q8NFP0 134 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 TMEM56-RWDD3S4R434 201 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 CA11O75493 328 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 PPYP01298 95 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 GNG4P50150 75 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 Q0VFX4 171 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 LINC00303Q3SY05 128 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 ST6GALNAC3Q8NDV1 305 aa6.12□□□□□ -1.43
RAG1-201ENST00000299440 RBPMSQ93062 196 aaKnown RBP6.12□□□□□ -1.43
RAG1-201ENST00000299440 DHRS7CA6NNS2 312 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms