RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 PPP1R35Q8TAP8 253 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 GPX8Q8TED1 209 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 SMIM4Q8WVI0 70 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 IL1F10Q8WWZ1 152 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 ARL11Q969Q4 196 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 TMEM186Q96B77 213 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 S100A16Q96FQ6 103 aaKnown RBP5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 C1orf159Q96HA4 380 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF714Q96N38 554 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 SOSTQ9BQB4 213 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 TINAGL1Q9GZM7 467 aaPredicted RBP5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 FXYD6Q9H0Q3 95 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 RHOFQ9HBH0 211 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 TAF9BQ9HBM6 251 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 SPACA1Q9HBV2 294 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 IFT46Q9NQC8 304 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 HSF4Q9ULV5 492 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 LINC00312Q9Y6C7 94 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 AKAP9Q99996 3911 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 NIPBLQ6KC79 2804 aaeCLIP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 DSCAML1Q8TD84 2053 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 TRBV23-1A0A0A0MS06 115 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 hADV38S2A0JD32 116 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 FABP12A6NFH5 140 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 SERPINE3A8MV23 424 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 B4DSR2 109 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 RNASEK-C17orf49H0YIS7 233 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 BET1O15155 118 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 LPLP06858 475 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 LIPFP07098 398 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF728P0DKX0 622 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 CGB3P0DN86 165 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 CGB7P0DN87 165 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 MMP9P14780 707 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 NFYAP23511 347 aaPredicted RBP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 PRSS3P35030 304 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 GZMKP49863 264 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 PPP5CP53041 499 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 MRPS15P82914 257 aaKnown RBP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 RBM39Q14498 530 aaKnown RBP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 PNLIPRP3Q17RR3 467 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 KLF17Q5JT82 389 aaPredicted RBP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 DCAF12L2Q5VW00 463 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 CYB5R2Q6BCY4 276 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 FAHD2BQ6P2I3 314 aaPredicted RBP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 BRD3OSQ6XYD6 125 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 LHFPL4Q7Z7J7 247 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 C22orf15Q8WYQ4 148 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 LHX4Q969G2 390 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 FAHD2AQ96GK7 314 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 C18orf12Q96KH6 178 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 SEBOXQ9HB31 216 aaPredicted RBP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 ABCB10Q9NRK6 738 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 IDI2-AS1Q9NZ38 188 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 KLK11Q9UBX7 282 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 ANAPC10Q9UM13 185 aa5.29□□□□□ -1.56
DEPDC4-201ENST00000299185 YLPM1P49750 1951 aaKnown RBP5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 TRBV6-6A0A0A6YYG2 114 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 A0A0A6YYH2 397 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 TRAV20A0A0B4J274 112 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 IGKV1D-13A0A0B4J2D9 117 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 KIR2DS1A0A191URI9 304 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 KBTBD11-OT1A0A1B0GTJ5 212 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 A6NJ64 397 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF729A6NN14 1252 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 C17orf98A8MV24 154 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 TRDCB7Z8K6 153 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 CD5LO43866 347 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 SCGNO76038 276 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 TOX4O94842 621 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 HEXAP06865 529 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 MELTFP08582 738 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 IGHV1-8P0DP01 117 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 IGKV1-13P0DP09 117 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 CD99P14209 185 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 AADACP22760 399 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 DTYMKP23919 212 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 ERP29P30040 261 aaKnown RBP5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 RCVRNP35243 200 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 HRH1P35367 487 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 REG1BP48304 166 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 KCNJ3P48549 501 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 NPY4RP50391 375 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 FXYD4P59646 89 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 SRSF2Q01130 221 aaKnown RBP5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 IFITM3Q01628 133 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 PAX8Q06710 450 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 DIAPH2-AS1Q14236 149 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 C6orf183Q5T699 404 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 PYHIN1Q6K0P9 492 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 BTNL3Q6UXE8 466 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 MOB1BQ7L9L4 216 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 HOGA1Q86XE5 327 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 BCL6BQ8N143 479 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 DYNAPQ8N1N2 210 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 BEST4Q8NFU0 473 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 OR5D13Q8NGL4 314 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 SPATA3Q8NHX4 192 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 TNFRSF14Q92956 283 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms