RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 OMGP23515 440 aa20.18■□□□□ 0.82
TRIM54-201ENST00000296098 CAMLGP49069 296 aa20.18■□□□□ 0.82
TRIM54-201ENST00000296098 ZNF616Q08AN1 781 aa20.18■□□□□ 0.82
TRIM54-201ENST00000296098 UFSP2Q9NUQ7 469 aa20.18■□□□□ 0.82
TRIM54-201ENST00000296098 STRAPQ9Y3F4 350 aaKnown RBP20.18■□□□□ 0.82
TRIM54-201ENST00000296098 INTS1Q8N201 2190 aaKnown RBP20.18■□□□□ 0.82
TRIM54-201ENST00000296098 TMEM50AO95807 157 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 TSPAN15O95858 294 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 CD5P06127 495 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 BAXQ07812 192 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 SLC35E4Q6ICL7 350 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 PRR7Q8TB68 274 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 CACFD1Q9UGQ2 172 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 RNF115Q9Y4L5 304 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 CNOT1A5YKK6 2376 aaKnown RBP20.17■□□□□ 0.82
TRIM54-201ENST00000296098 PROB1E7EW31 1015 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 MIDNQ504T8 468 aa20.17■□□□□ 0.82
TRIM54-201ENST00000296098 LSM10Q969L4 123 aaKnown RBP20.17■□□□□ 0.82
TRIM54-201ENST00000296098 TM4SF5O14894 197 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 CHST1O43916 411 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 IGKV1-39P01597 117 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 PRH1P02810 166 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 IGKV1D-39P04432 117 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 SFTA3P0C7M3 94 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 DVL1P1P54792 670 aaPredicted RBP20.16■□□□□ 0.82
TRIM54-201ENST00000296098 HOXA4Q00056 320 aaPredicted RBP20.16■□□□□ 0.82
TRIM54-201ENST00000296098 SMIM21Q3B7S5 101 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 COMMD1Q8N668 190 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 C19orf12Q9NSK7 152 aa20.16■□□□□ 0.82
TRIM54-201ENST00000296098 C12orf77C9JDV5 145 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 SNAPINO95295 136 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 CD80P33681 288 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 OR3A1P47881 315 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 EIF2S3LQ2VIR3 472 aaKnown RBP20.15■□□□□ 0.82
TRIM54-201ENST00000296098 ODF3L1Q8IXM7 274 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 DRAM1Q8N682 238 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 OR5C1Q8NGR4 320 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 OR1L1Q8NH94 360 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 TMEM171Q8WVE6 324 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 GALMQ96C23 342 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 FAM215AQ9Y5M1 114 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 A0A1B0GWJ7 208 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 OOEPA6NGQ2 149 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 PTBP3O95758 552 aaKnown RBP20.15■□□□□ 0.82
TRIM54-201ENST00000296098 ZNF16P17020 682 aaPredicted RBP20.15■□□□□ 0.82
TRIM54-201ENST00000296098 AESQ08117 197 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 MZT1Q08AG7 82 aa20.15■□□□□ 0.82
TRIM54-201ENST00000296098 TMEM182Q6ZP80 229 aaPredicted RBP20.15■□□□□ 0.82
TRIM54-201ENST00000296098 RNF212BA8MTL3 300 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 CST7O76096 145 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 FHITP49789 147 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 C1orf185Q5T7R7 199 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 COQ2Q96H96 371 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 DMXL1Q9Y485 3027 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 PRRC2CQ9Y520 2896 aaKnown RBP20.14■□□□□ 0.81
TRIM54-201ENST00000296098 C1QL1O75973 258 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 IL2RGP31785 369 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 CD200P41217 278 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 DYNLT3P51808 116 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 PAX9P55771 341 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 CACNG5Q9UF02 275 aa20.14■□□□□ 0.81
TRIM54-201ENST00000296098 TRIM77I1YAP6 450 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 IFNL4K9M1U5 179 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 F12P00748 615 aaPredicted RBP20.13■□□□□ 0.81
TRIM54-201ENST00000296098 ATP6V0CP27449 155 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 SNCAP37840 140 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 GABRA2P47869 451 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 ZNF83P51522 516 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 ZNF585BQ52M93 769 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 RAB40CQ96S21 281 aa20.13■□□□□ 0.81
TRIM54-201ENST00000296098 ZFHX4Q86UP3 3567 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 KIAA1324LA8MWY0 1029 aaPredicted RBP20.12■□□□□ 0.81
TRIM54-201ENST00000296098 FAM157AC9JC47 383 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 K7N7A8 449 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 KLK10O43240 276 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 IGKV1-5P01602 117 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 TFF1P04155 84 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 NBL1P41271 181 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 COL10A1Q03692 680 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 IZUMO4Q1ZYL8 232 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 RPRMLQ8N4K4 120 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 TMEM217Q8N7C4 229 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 ZNF645Q8N7E2 425 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 LRRC29Q8WV35 223 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 S100PBPQ96BU1 408 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 HBZP02008 142 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 CRYABP02511 175 aaKnown RBP20.12■□□□□ 0.81
TRIM54-201ENST00000296098 RPL23AP62750 156 aaKnown RBP20.12■□□□□ 0.81
TRIM54-201ENST00000296098 TIMM23BQ5SRD1 257 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 ZNF474Q6S9Z5 364 aaPredicted RBP20.12■□□□□ 0.81
TRIM54-201ENST00000296098 Q6ZRM9 215 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 STX12Q86Y82 276 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 RBMXL3Q8N7X1 1067 aaKnown RBP20.12■□□□□ 0.81
TRIM54-201ENST00000296098 CLRN3Q8NCR9 226 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 OR2Z1Q8NG97 314 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 WASF3Q9UPY6 502 aa20.12■□□□□ 0.81
TRIM54-201ENST00000296098 GTF3C1Q12789 2109 aa20.11■□□□□ 0.81
TRIM54-201ENST00000296098 FRYQ5TBA9 3013 aa20.11■□□□□ 0.81
TRIM54-201ENST00000296098 C9JQL5 133 aa20.11■□□□□ 0.81
TRIM54-201ENST00000296098 M0R1B8 84 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms