RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PQLC2Q6ZP29 291 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 A8MXK9 166 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 LIPFP07098 398 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 LINC00696Q6ZRV3 163 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 RBKSQ9H477 322 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 CHODLQ9H9P2 273 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 BCL2L10Q9HD36 194 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 DNAL4O96015 105 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 AGAP20933 346 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 CA13Q8N1Q1 262 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 ZNF519Q8TB69 540 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 ATAD5Q96QE3 1844 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 LAMB2P55268 1798 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 CA3P07451 260 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 OR4A8P0C604 315 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 CCR5P51681 352 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 OR2V2Q96R30 315 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 A0A0B4J2E0 115 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 A0A1B0GX12 115 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 MAS1LP35410 378 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 IRF3Q14653 427 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 PP6455Q8WZ26 134 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 APOBEC3DQ96AK3 386 aaPredicted RBP10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 PGLYRP3Q96LB9 341 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 RAXQ9Y2V3 346 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 PLCH1Q4KWH8 1693 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 SHISA8B8ZZ34 492 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 IGFBP7Q16270 282 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 BOD1Q96IK1 185 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 K7ESF4 209 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 PRSS23O95084 383 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 CKS2P33552 79 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 B4GALNT1Q00973 533 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 SLC26A1Q9H2B4 701 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 WNT16Q9UBV4 365 aa10.35□□□□□ -0.75
SHROOM3-201ENST00000296043 IGHV4-39P01824 125 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 SARGQ9BW04 601 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 GNB2P62879 340 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 ARHGAP32A7KAX9 2087 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 A0A1W2PRS3 328 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 SCRG1O75711 98 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 LYZL6O75951 148 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TBX6O95947 436 aaPredicted RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 ISG15P05161 165 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 NUTF2P61970 127 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 COL10A1Q03692 680 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TSPAN32Q96QS1 320 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 MRM2Q9UI43 246 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 RAMP1O60894 148 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 ARL14EPLP0DKL9 152 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 OR4D5Q8NGN0 318 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 PDCD6O75340 191 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 DCDP81605 110 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 IBA57Q5T440 356 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TANC2Q9HCD6 1990 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 M0R1B8 84 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 RBFOX2O43251 390 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 HOXA4Q00056 320 aaPredicted RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 DMKNQ6E0U4 476 aaPredicted RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 MRGPRDQ8TDS7 321 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 CISD1Q9NZ45 108 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 GALNT14Q96FL9 552 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 ERGP11308 486 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 FCGR2BP31994 310 aaPredicted RBP10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 RTP5Q14D33 572 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TET1Q8NFU7 2136 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TIMP4Q99727 224 aa10.34□□□□□ -0.75
SHROOM3-201ENST00000296043 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 ZNF117Q03924 483 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 OR4X1Q8NH49 305 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 PPP1CCP36873 323 aaKnown RBP10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 PDLIM7Q9NR12 457 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 PPIL1Q9Y3C6 166 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 TM4SF1P30408 202 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 EFNB1P98172 346 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 HS3ST2Q9Y278 367 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 SH2D7A6NKC9 451 aaPredicted RBP10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 PRSS12P56730 875 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 HIKESHIQ53FT3 197 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 IP6K3Q96PC2 410 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 ACACAQ13085 2346 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 TCRBV5S1A1TA0A578 114 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 A8MWL6 223 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 GFI1BQ5VTD9 330 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 ZNF788Q6ZQV5 615 aa10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 QTRT1Q9BXR0 403 aaKnown RBP10.33□□□□□ -0.76
SHROOM3-201ENST00000296043 LINC00470Q9BZP3 86 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms