RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 EPHA1P21709 976 aa18.39■□□□□ 0.53
LINC01116-201ENST00000295549 HOGA1Q86XE5 327 aa18.39■□□□□ 0.53
LINC01116-201ENST00000295549 LURAP1LQ8IV03 231 aa18.39■□□□□ 0.53
LINC01116-201ENST00000295549 C8orf31Q8N9H6 132 aa18.39■□□□□ 0.53
LINC01116-201ENST00000295549 BEND2Q8NDZ0 799 aa18.39■□□□□ 0.53
LINC01116-201ENST00000295549 GPX8Q8TED1 209 aa18.39■□□□□ 0.53
LINC01116-201ENST00000295549 GCDHQ92947 438 aaPredicted RBP18.39■□□□□ 0.53
LINC01116-201ENST00000295549 MS4A7Q9GZW8 240 aaPredicted RBP18.39■□□□□ 0.53
LINC01116-201ENST00000295549 IGKV1D-8A0A087WSZ0 117 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 IGHV3-43A0A0B4J1X8 118 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 FAM172BPA6NC97 362 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 IGLV1-47P01700 117 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 GSTT2P0CG29 244 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 GSTT2BP0CG30 244 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 FAM157CP0CG43 387 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 IGHV3-43DP0DP04 118 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 MADCAM1Q13477 382 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 TUSC1Q2TAM9 212 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 LY6G6FQ5SQ64 297 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 RUSC1-AS1Q66K80 236 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 GVQW1Q8N7I0 195 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 OR6Q1Q8NGQ2 317 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 ZNF596Q8TC21 504 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 CABLES2Q9BTV7 478 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 ANAPC10Q9UM13 185 aa18.38■□□□□ 0.53
LINC01116-201ENST00000295549 NIPBLQ6KC79 2804 aaeCLIP18.37■□□□□ 0.53
LINC01116-201ENST00000295549 IGKV1-6A0A0C4DH72 117 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 J3QR06 171 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 YPEL1O60688 119 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 ARG1P05089 322 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 SAA4P35542 130 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 PRRX1P54821 245 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 MRPS10P82664 201 aaKnown RBP18.37■□□□□ 0.53
LINC01116-201ENST00000295549 HERPUD1Q15011 391 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 MORN2Q502X0 79 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 PYHIN1Q6K0P9 492 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 CCDC190Q86UF4 302 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 BEST4Q8NFU0 473 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 OR52L2PQ8NGH6 319 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 LEAP2Q969E1 77 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 YPEL2Q96QA6 119 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 ANXA10Q9UJ72 324 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 ZFHX3Q15911 3703 aa18.37■□□□□ 0.53
LINC01116-201ENST00000295549 A0A1W2PRD5 423 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 A0A1W2PRF3 423 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 A0A1W2PRM7 423 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 FABP12A6NFH5 140 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 TOR1AO14656 332 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 RGS11O94810 467 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 ZBTB25P24278 435 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 LGALS4P56470 323 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 IL18Q14116 193 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 IGSF11Q5DX21 431 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 FAM53AQ6NSI3 398 aaPredicted RBP18.36■□□□□ 0.53
LINC01116-201ENST00000295549 LINC00311Q8N616 119 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 OR10V1Q8NGI7 309 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 OR4P4Q8NGL7 312 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 SLC23A1Q9UHI7 598 aa18.36■□□□□ 0.53
LINC01116-201ENST00000295549 TBL2Q9Y4P3 447 aaKnown RBP18.36■□□□□ 0.53
LINC01116-201ENST00000295549 TRBV6-7A0A0A0MS04 114 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 CTDSPLO15194 276 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 IGHV3-7P01780 117 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 CTXN2P0C2S0 81 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 NAT1P18440 290 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 PPP1CCP36873 323 aaKnown RBP18.35■□□□□ 0.53
LINC01116-201ENST00000295549 GNMTQ14749 295 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 HLA-DRB5Q30154 266 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 MINOS1Q5TGZ0 78 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 BCL6BQ8N143 479 aaPredicted RBP18.35■□□□□ 0.53
LINC01116-201ENST00000295549 ZNF439Q8NDP4 499 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 C22orf15Q8WYQ4 148 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 CREB3L1Q96BA8 519 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 AJUBAQ96IF1 538 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 MMP28Q9H239 520 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 IFT46Q9NQC8 304 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 MINOS1-NBL1R4GNA1 71 aa18.35■□□□□ 0.53
LINC01116-201ENST00000295549 MEIS3P1A6NDR6 274 aa18.34■□□□□ 0.53
LINC01116-201ENST00000295549 HSPA12AO43301 675 aa18.34■□□□□ 0.53
LINC01116-201ENST00000295549 ETV6P41212 452 aa18.34■□□□□ 0.53
LINC01116-201ENST00000295549 SLC25A48Q6ZT89 311 aaKnown RBP18.34■□□□□ 0.53
LINC01116-201ENST00000295549 SNAPC3Q92966 411 aa18.34■□□□□ 0.53
LINC01116-201ENST00000295549 TOLLIPQ9H0E2 274 aa18.34■□□□□ 0.53
LINC01116-201ENST00000295549 GABARAPH6UMI1 98 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 PTBP1P26599 531 aaKnown RBP eCLIP18.33■□□□□ 0.53
LINC01116-201ENST00000295549 HTR1DP28221 377 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 CEACAM6P40199 344 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 GNG10P50151 68 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 ZNF134P52741 427 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 FAM131AQ6UXB0 335 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 OR52I2Q8NH67 350 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 OR10J5Q8NHC4 309 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 PRDM13Q9H4Q3 707 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 PTTG2Q9NZH5 202 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 OR1A1Q9P1Q5 309 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 FAM96BQ9Y3D0 163 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 SOX21Q9Y651 276 aaPredicted RBP18.33■□□□□ 0.53
LINC01116-201ENST00000295549 V9GYH0 126 aa18.33■□□□□ 0.53
LINC01116-201ENST00000295549 A0A0U1RQK1 487 aa18.32■□□□□ 0.52
LINC01116-201ENST00000295549 BUB1B-PAK6H3BSN5 160 aa18.32■□□□□ 0.52
LINC01116-201ENST00000295549 ITGB1BP1O14713 200 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms