RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TMUB1Q9BVT8 246 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 MYO7AQ13402 2215 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 OGG1O15527 345 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 GALP22466 123 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 ZNF79Q15937 498 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 SPANXN1Q5VSR9 72 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 PERPQ96FX8 193 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 MRPS18BQ9Y676 258 aaKnown RBP14.1□□□□□ -0.15
SSRP1-202ENST00000293880 IGHV3OR16-12A0A075B7B8 117 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 CDS2O95674 445 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 IGHV1OR21-1A0A087WYE8 117 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 PLA2G10O15496 165 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 MRPL30Q8TCC3 161 aaKnown RBP14.09□□□□□ -0.15
SSRP1-202ENST00000293880 OR2H1Q9GZK4 316 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 CTAG1AP78358 180 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 SSPNQ14714 243 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 ZNF519Q8TB69 540 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 HARBI1Q96MB7 349 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 ATP6V0CP27449 155 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 SLC25A30Q5SVS4 291 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 TMEM136Q6ZRR5 245 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 VN1R4Q7Z5H5 301 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 PGLYRP4Q96LB8 373 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 GPHA2Q96T91 129 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 OPN4Q9UHM6 478 aa14.09□□□□□ -0.15
SSRP1-202ENST00000293880 CYB5R3P00387 301 aaPredicted RBP14.08□□□□□ -0.15
SSRP1-202ENST00000293880 FXYD3Q14802 87 aa14.08□□□□□ -0.15
SSRP1-202ENST00000293880 CDX2Q99626 313 aaPredicted RBP14.08□□□□□ -0.15
SSRP1-202ENST00000293880 CRISPLD2Q9H0B8 497 aa14.08□□□□□ -0.15
SSRP1-202ENST00000293880 IGHV3-72A0A0B4J1Y9 119 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 SLC25A17O43808 307 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 VSIG10L2P0DP72 767 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PAFAH1B2P68402 229 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 LINC00518Q8N0U6 118 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 THYN1Q9P016 225 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 LIPT2A6NK58 231 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PITX3O75364 302 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PRSS23O95084 383 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PGA4P0DJD7 388 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PGA5P0DJD9 388 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 TEX30Q5JUR7 227 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 WDFY1Q8IWB7 410 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PCGF1Q9BSM1 259 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 OVCH2Q7RTZ1 564 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 OR6X1Q8NH79 312 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 SLC25A40Q8TBP6 338 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 OR51M1Q9H341 326 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 LNP1A1A4G5 178 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 M0R296 226 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 CD300LDQ6UXZ3 194 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 ZFP64Q9NPA5 681 aa14.08□□□□□ -0.16
SSRP1-202ENST00000293880 PRSS2P07478 247 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 ASB5Q8WWX0 329 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 RAB1BQ9H0U4 201 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 CENPVL1A0A0U1RR11 272 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 CTSSP25774 331 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 ATG4DQ86TL0 474 aaPredicted RBP14.07□□□□□ -0.16
SSRP1-202ENST00000293880 DYNLRB2Q8TF09 96 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 EPHA8P29322 1005 aaPredicted RBP14.07□□□□□ -0.16
SSRP1-202ENST00000293880 TNRC6CQ9HCJ0 1690 aaKnown RBP14.07□□□□□ -0.16
SSRP1-202ENST00000293880 TRAV17A0A0B4J275 112 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 BRS3P32247 399 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 PTP4A1Q93096 173 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 ST6GALNAC6Q969X2 333 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 PAXXQ9BUH6 204 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 HIGD1AQ9Y241 93 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 TRAV38-1A0A0B4J264 116 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 EML2O95834 649 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 RAG2P55895 527 aa14.07□□□□□ -0.16
SSRP1-202ENST00000293880 NDUFS8O00217 210 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 IL9P15248 144 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 NAAAQ02083 359 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 SAMD13Q5VXD3 122 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 OR8I2Q8N0Y5 310 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 DTX4Q9Y2E6 619 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 CCL3P10147 92 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 CEACAM3P40198 252 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 ZIC1Q15915 447 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 SPEM1Q8N4L4 309 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 Q8WTZ3 238 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 PARP11Q9NR21 331 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 RPL36A-HNRNPH2H7BZ11 118 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 UBE2L6O14933 153 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 CISD3P0C7P0 127 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
SSRP1-202ENST00000293880 TM4SF20Q53R12 229 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 TEPPQ6URK8 271 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 COX6CP09669 75 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 VSIG8P0DPA2 414 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 SGMS2Q8NHU3 365 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 OPN3Q9H1Y3 402 aaPredicted RBP14.06□□□□□ -0.16
SSRP1-202ENST00000293880 HILPDAQ9Y5L2 63 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 A0A0B4J293 547 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 C7orf71A4D174 169 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 AMMECR1LQ6DCA0 310 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 OR2Y1Q8NGV0 311 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 SCN7AQ01118 1682 aa14.06□□□□□ -0.16
SSRP1-202ENST00000293880 PTPRZ1P23471 2315 aaPredicted RBP14.06□□□□□ -0.16
SSRP1-202ENST00000293880 OR1P1Q8NH06 330 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 NEU1Q99519 415 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms