RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 C19orf48Q6RUI8 117 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 TUBA4BQ9H853 241 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 MPC1Q9Y5U8 109 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 CXorf1O96002 111 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 MT-CO3P00414 261 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 TRGC2P03986 189 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 COX6CP09669 75 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 KIR2DL1P43626 348 aaPredicted RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 KIR2DL2P43627 348 aaPredicted RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 SLC35B1P78383 322 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 SNRNP40Q96DI7 357 aaKnown RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 OR2J1Q9GZK6 312 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 SMDT1Q9H4I9 107 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 ZSWIM8A7E2V4 1837 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 A0A1W2PRD5 423 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 A0A1W2PRF3 423 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 A0A1W2PRM7 423 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 TNFRSF9Q07011 255 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 NUP214P35658 2090 aaPredicted RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 SPTY2D1-AS1A0A0U1RR47 76 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 LOC389332A0A1B0GUA5 103 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 CTSVO60911 334 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 IGHV2-70P01814 119 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 HOXA5P20719 270 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 RELBQ01201 579 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 C10orf113Q5VZT2 155 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 C12orf54Q6X4T0 127 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 PRSS41Q7RTY9 318 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 ADAD2Q8NCV1 583 aaKnown RBP9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 STXBP6Q8NFX7 210 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 OR10D3Q8NH80 312 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
PKNOX1-201ENST00000291547 THSD7BQ9C0I4 1608 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 A6NJY4 79 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 HBZP02008 142 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 MUC1P15941 1255 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 RCC1P18754 421 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 PRICKLE4Q2TBC4 344 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 GFRALQ6UXV0 394 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 OIT3Q8WWZ8 545 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 ASCL3Q9NQ33 180 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 CA10Q9NS85 328 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 CABIN1Q9Y6J0 2220 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 CEP290O15078 2479 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 KCNE1BA0A087WTH5 132 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 LYZL6O75951 148 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 WNT5AP41221 380 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 MRPL52Q86TS9 123 aaKnown RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 OR1K1Q8NGR3 316 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 FAM222BQ8WU58 562 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 TM4SF19Q96DZ7 209 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 GABRG3Q99928 467 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 RASL11BQ9BPW5 248 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 ZNF107Q9UII5 783 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 AMMECR1Q9Y4X0 333 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 TRAV17A0A0B4J275 112 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 OR2A4O95047 310 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 BCL2P10415 239 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 LGALS7P47929 136 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 KLF3P57682 345 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 MGAT2Q10469 447 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 SPATA45Q537H7 98 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 OR2A7Q96R45 310 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 OR4C45A6NMZ5 311 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 PEX11BO96011 259 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 C16orf47Q6ZP98 133 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 Q8WTZ3 238 aa9.41□□□□□ -0.9
PKNOX1-201ENST00000291547 GALNSP34059 522 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 PMELP40967 661 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 GPR3P46089 330 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 CCL7P80098 99 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 SPANXN1Q5VSR9 72 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 TMEM204Q9BSN7 226 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 LRRC61Q9BV99 259 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 FFAR1O14842 300 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 TEPPQ6URK8 271 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 CXXC4Q9H2H0 198 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 CLEC1BQ9P126 229 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 TRAV8-7A0A075B6U6 113 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 A0A1B0GU03 582 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 CLDN18P56856 261 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 H1FOOQ8IZA3 346 aaPredicted RBP9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 BEND2Q8NDZ0 799 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 ZNF519Q8TB69 540 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 ADAMTS17Q8TE56 1095 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.9
PKNOX1-201ENST00000291547 DHRS7CA6NNS2 312 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 B4E171 279 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 SOD3P08294 240 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 METAP1P53582 386 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 RUNX1Q01196 453 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms