RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FCGR3AP08637 254 aa15.3■□□□□ 0.04
PCDHA13-201ENST00000289272 ALKBH3Q96Q83 286 aaPredicted RBP15.3■□□□□ 0.04
PCDHA13-201ENST00000289272 FGF16O43320 207 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 DMRTC1Q5HYR2 192 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 RBM14Q96PK6 669 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 OR2D2Q9H210 308 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 PLXNA1Q9UIW2 1896 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 A0A1W2PN81 502 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 PIN1P1O15428 100 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 HIST1H1BP16401 226 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 UBE2L3P68036 154 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 HES3Q5TGS1 186 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 MRPL52Q86TS9 123 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 PDPNQ86YL7 162 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 TMEM52Q8NDY8 209 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 VSTM2AQ8TAG5 236 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 PERPQ96FX8 193 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 BARX1Q9HBU1 254 aaPredicted RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 CENPVL1A0A0U1RR11 272 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 DXOO77932 396 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 KBTBD11O94819 623 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 BTF3P20290 206 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 FZD5Q13467 585 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 WIPI1Q5MNZ9 446 aaPredicted RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 NFAM1Q8NET5 270 aaPredicted RBP15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 MOB3AQ96BX8 217 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 WDR54Q9H977 334 aa15.29■□□□□ 0.04
PCDHA13-201ENST00000289272 A0A0G2JK05 382 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 GALNT14Q96FL9 552 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 A0A1W2PQF6 199 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 OR2T8A6NH00 312 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 NEURL1O76050 574 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 PSMG4Q5JS54 123 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 ADAT3Q96EY9 351 aaPredicted RBP15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 DHRS7CA6NNS2 312 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 P01737 135 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 OR2M7Q8NG81 312 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 R4GN57 208 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 MPZL1O95297 269 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 ZNF32P17041 273 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 GAMTQ14353 236 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 ZNF124Q15973 351 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 TSPO2Q5TGU0 170 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 CYB5R2Q6BCY4 276 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 C1QL4Q86Z23 238 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 R3HDM4Q96D70 268 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 KLHDC2Q9Y2U9 406 aa15.28■□□□□ 0.04
PCDHA13-201ENST00000289272 FCGR3BO75015 233 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 FABP2P12104 132 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 SRSF5Q13243 272 aaKnown RBP15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 Q1RN00 199 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 TM4SF19Q96DZ7 209 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 PCGF1Q9BSM1 259 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 FUT5Q11128 374 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 C16orf47Q6ZP98 133 aaPredicted RBP15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 CCL28Q9NRJ3 127 aa15.27■□□□□ 0.04
PCDHA13-201ENST00000289272 A0A1B0GTI1 187 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 F8VVB4 439 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 F8VWA3 439 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 OR2T6Q8NHC8 308 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 KLF4O43474 513 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 F2RP25116 425 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 MSL2Q9HCI7 577 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 PRNDQ9UKY0 176 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 AUP1Q9Y679 476 aa15.27■□□□□ 0.03
PCDHA13-201ENST00000289272 ORM1P02763 201 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 BTCP35070 178 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 ZNF774Q6NX45 483 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 ZNF519Q8TB69 540 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 BRCA1P38398 1863 aaKnown RBP15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 H0YL77 283 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 MPZP25189 248 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 HES1Q14469 280 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 ERASQ7Z444 233 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 C5orf66Q9H5L9 145 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 RALGAPA2Q2PPJ7 1873 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 HERVK_113P61574 105 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 TEPPQ6URK8 271 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 AMY1AP04745 511 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 SLC25A34Q6PIV7 304 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 CT55Q8WUE5 264 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 GNRHR2Q96P88 292 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 RSG1Q9BU20 258 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 OR6C3Q9NZP0 311 aa15.26■□□□□ 0.03
PCDHA13-201ENST00000289272 PSG5Q15238 335 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 BLNKQ8WV28 456 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 SPINK4O60575 86 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 AGAP20933 346 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 CAMPP49913 170 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 OR5A2Q8NGI9 324 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 ACTL6AO96019 429 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 RBM11P57052 281 aaKnown RBP15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 TCFL5Q9UL49 500 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 LOC390937A0A1W2PQ73 354 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 B4E171 279 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 FOXS1O43638 330 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 TSPAN7P41732 249 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
PCDHA13-201ENST00000289272 A0A1B0GV72 72 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms