RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ING3Q9NXR8 418 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 STEAP1Q9UHE8 339 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 STUB1Q9UNE7 303 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 TCF19Q9Y242 345 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1B0GUS0 222 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 A0A1W2PPI3 338 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 UBE2QL1A1L167 161 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 CLPSL1A2RUU4 121 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 H3BUI4 141 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 AIPO00170 330 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 ARSBP15848 533 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 RAG2P55895 527 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 HTD2P86397 168 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 EBI3Q14213 229 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 HMGN3Q15651 99 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 MOGAT2Q3SYC2 334 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 CT45A1Q5HYN5 189 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 TPTE2P1Q5T6R2 138 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 STEAP3Q658P3 488 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 TRAPPC6BQ86SZ2 158 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 ODF3L1Q8IXM7 274 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 OR4K15Q8NH41 348 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 CT45A3Q8NHU0 189 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 CCDC107Q8WV48 283 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 LEAP2Q969E1 77 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 ARL11Q969Q4 196 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 CITED1Q99966 193 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 CENPOQ9BU64 300 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 TMEM59Q9BXS4 323 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 MMP28Q9H239 520 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 TNFRSF19Q9NS68 423 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 SERTAD4Q9NUC0 356 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 ETAA1Q9NY74 926 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 DNAH3Q8TD57 4116 aa7.33□□□□□ -1.24
HMGN1-201ENST00000288344 A0A0B4J203 849 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 FAM172BPA6NC97 362 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 LEUTXA8MZ59 168 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 OOSP1A8MZH6 123 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 SLC31A2O15432 143 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 PROP1O75360 226 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 HBZP02008 142 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 CLEC2LP0C7M8 214 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 SMIM18P0DKX4 95 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 RAB3BP20337 219 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 GADD45AP24522 165 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 PSMB9P28065 219 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 BLVRBP30043 206 aaPredicted RBP7.32□□□□□ -1.24
HMGN1-201ENST00000288344 GLP1RP43220 463 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 LGALS4P56470 323 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 ACTG1P63261 375 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 SRSF4Q08170 494 aaKnown RBP7.32□□□□□ -1.24
HMGN1-201ENST00000288344 RAB11BQ15907 218 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 MORN2Q502X0 79 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 HES5Q5TA89 166 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 OLFML2AQ68BL7 652 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 C12orf54Q6X4T0 127 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 SLC25A48Q6ZT89 311 aaKnown RBP7.32□□□□□ -1.24
HMGN1-201ENST00000288344 TPRA1Q86W33 373 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 TSPAN14Q8NG11 270 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 OR1L1Q8NH94 360 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 UBALD1Q8TB05 177 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 ZNF251Q9BRH9 671 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 AGMATQ9BSE5 352 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 TOLLIPQ9H0E2 274 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 TAF9BQ9HBM6 251 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.32□□□□□ -1.24
HMGN1-201ENST00000288344 RAB22AQ9UL26 194 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 HILPDAQ9Y5L2 63 aa7.32□□□□□ -1.24
HMGN1-201ENST00000288344 A0A087WXM4 84 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 IGKV1-6A0A0C4DH72 117 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 NOTOA8MTQ0 251 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 MFNGO00587 321 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 YPEL1O60688 119 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 PAHP00439 452 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 IGHV3-7P01780 117 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 SLC2A2P11168 524 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-201ENST00000288344 CD36P16671 472 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 NFYBP25208 207 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 SDC2P34741 201 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 PRRX1P54821 245 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 BLCAPP62952 87 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 SUMO1P63165 101 aaKnown RBP7.31□□□□□ -1.24
HMGN1-201ENST00000288344 ZNF816Q0VGE8 651 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-201ENST00000288344 DYNC1I2Q13409 638 aaKnown RBP7.31□□□□□ -1.24
HMGN1-201ENST00000288344 LY6EQ16553 131 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 Q8N6K4 173 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 OR4F5Q8NH21 305 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 CREB3L1Q96BA8 519 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 ARHGAP5-AS1Q96IT6 56 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 YPEL2Q96QA6 119 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 HDHD3Q9BSH5 251 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-201ENST00000288344 PECRQ9BY49 303 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 RANBP3Q9H6Z4 567 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-201ENST00000288344 PLGRKTQ9HBL7 147 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 Q9N2K0 584 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 PLSCR3Q9NRY6 295 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 AK3Q9UIJ7 227 aa7.31□□□□□ -1.24
HMGN1-201ENST00000288344 MEGF8Q7Z7M0 2845 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms