RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 DYNLT3P51808 116 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 PDZD11Q5EBL8 140 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 FA2HQ7L5A8 372 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 MIXL1Q9H2W2 232 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 ELOVL5Q9NYP7 299 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 GATCO43716 136 aaKnown RBP16.02■□□□□ 0.16
PCDH1-201ENST00000287008 OR2H2O95918 312 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 FCGR3AP08637 254 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 FAM106CPP0CH98 169 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 C4orf17Q53FE4 359 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 FAM209AQ5JX71 171 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 NPAS1Q99742 590 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 PITPNC1Q9UKF7 332 aa16.02■□□□□ 0.16
PCDH1-201ENST00000287008 MMP7P09237 267 aaPredicted RBP16.02■□□□□ 0.15
PCDH1-201ENST00000287008 TMEM241Q24JQ0 296 aa16.02■□□□□ 0.15
PCDH1-201ENST00000287008 WFDC6Q9BQY6 131 aa16.02■□□□□ 0.15
PCDH1-201ENST00000287008 MRPL22Q9NWU5 206 aaKnown RBP16.02■□□□□ 0.15
PCDH1-201ENST00000287008 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.15
PCDH1-201ENST00000287008 ZNF705AQ6ZN79 300 aaPredicted RBP16.02■□□□□ 0.15
PCDH1-201ENST00000287008 LYZL2Q7Z4W2 148 aa16.02■□□□□ 0.15
PCDH1-201ENST00000287008 PRDM14Q9GZV8 571 aa16.02■□□□□ 0.15
PCDH1-201ENST00000287008 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 RFLNBQ8N5W9 214 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 RHOVQ96L33 236 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 VSIG4Q9Y279 399 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 CHCHD2Q9Y6H1 151 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-201ENST00000287008 IGKV3D-11A0A0A0MRZ8 115 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 NKX2-6A6NCS4 301 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 NPIPB13A6NJU9 1138 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 NPIPB4C9JG80 1138 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 SLC35B1P78383 322 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 TIMM23BQ5SRD1 257 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 IGKV1D-42A0A075B6H8 117 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 ODAMA1E959 279 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 B9A039 149 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 HPRT1P00492 218 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 PSG2P11465 335 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 OR4X1Q8NH49 305 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 LINC01560Q8TB33 94 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 ATP5SQ99766 215 aa16.01■□□□□ 0.15
PCDH1-201ENST00000287008 ZFC3H1O60293 1989 aaKnown RBP16.01■□□□□ 0.15
PCDH1-201ENST00000287008 A0A1W2PP11 408 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 HMSDA8MTL9 139 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 RECKO95980 971 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 LOC102723971A0A1B0GUV8 181 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 DHRS7CA6NNS2 312 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 TMEM229AB2RXF0 380 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 DEFA6Q01524 100 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 OR1L1Q8NH94 360 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 MIOXQ9UGB7 285 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 IGHV3-72A0A0B4J1Y9 119 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A10PA6NDY2 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A18PA6NE21 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A16PA6NEW6 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A20PA6NIJ5 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A8PA6NJQ4 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A7PA6NKC0 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A22PA8MWA6 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A12PA8MX19 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A5PA8MXJ8 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A23PA8MXZ1 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A15PP0C7V4 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A13PP0C7W8 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A14PP0C7W9 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 FAM90A24PP0C7X0 464 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 RAB5AP20339 215 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 STXBP6Q8NFX7 210 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 PHYHIPLQ96FC7 376 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 J3QW42 95 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 NAT2P11245 290 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 BVESQ8NE79 360 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 IMMP1LQ96LU5 166 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 PARP11Q9NR21 331 aa16■□□□□ 0.15
PCDH1-201ENST00000287008 YTHDF2Q9Y5A9 579 aaKnown RBP16■□□□□ 0.15
PCDH1-201ENST00000287008 ISG15P05161 165 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 SULT1A1P50225 295 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 PDLIM4P50479 330 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 CLLU1Q5K131 121 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 UQCC3Q6UW78 93 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 WNT5BQ9H1J7 359 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 MED19A0JLT2 244 aaPredicted RBP15.99■□□□□ 0.15
PCDH1-201ENST00000287008 PF4V1P10720 104 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 KLF9Q13886 244 aaPredicted RBP15.99■□□□□ 0.15
PCDH1-201ENST00000287008 MRPL14Q6P1L8 145 aaKnown RBP15.99■□□□□ 0.15
PCDH1-201ENST00000287008 MMP26Q9NRE1 261 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 DUXBA0A1W2PPF3 345 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 HTR1DP28221 377 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 GLRXP35754 106 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 GFRA1P56159 465 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 B2MP61769 119 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 PSG5Q15238 335 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 TMEM88Q6PEY1 159 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 LPAR5Q9H1C0 372 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 ARF6P62330 175 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 ZNF154Q13106 437 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 NHLRC2Q8NBF2 726 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 FAM103A1Q9BTL3 118 aaKnown RBP15.99■□□□□ 0.15
PCDH1-201ENST00000287008 LINC00470Q9BZP3 86 aa15.99■□□□□ 0.15
PCDH1-201ENST00000287008 SLC35B3Q9H1N7 401 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms