RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 OMGP23515 440 aa15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 GLIPR1P48060 266 aa15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 RBM11P57052 281 aaKnown RBP15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 MDP1Q86V88 176 aa15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 SELENOHQ8IZQ5 122 aaKnown RBP15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 CYB561D1Q8N8Q1 229 aa15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 CNEP1R1Q8N9A8 125 aa15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 CLEC18CQ8NCF0 446 aa15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 FGF23Q9GZV9 251 aaPredicted RBP15.59■□□□□ 0.09
PDLIM3-201ENST00000284767 ELOA3CA0A087WX78 387 aaPredicted RBP15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 ZNF816-ZNF321PA0A0X1KG74 233 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 B4DEV8 164 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 GNRHRP30968 328 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 WNT5AP41221 380 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 IGFBP7Q16270 282 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 DNLZQ5SXM8 178 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 AKR1C8PQ5T2L2 129 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 ZNF343Q6P1L6 599 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 Q6ZS49 121 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 TBC1D26Q86UD7 250 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 OR10G4Q8NGN3 311 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 CLDND2Q8NHS1 167 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 BCL2L2Q92843 193 aaPredicted RBP15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 GMPPAQ96IJ6 420 aaPredicted RBP15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 ZNF442Q9H7R0 627 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 GLRX2Q9NS18 164 aa15.58■□□□□ 0.09
PDLIM3-201ENST00000284767 RP1L1Q8IWN7 2480 aaPredicted RBP15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 PIEZO2Q9H5I5 2752 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BKO60814 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 LILRA1O75019 489 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 CEACAM4O75871 244 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BJP06899 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BOP23527 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BBP33778 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 DYNLT3P51808 116 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 CEBPGP53567 150 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BDP58876 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 ERVFRD-1P60508 538 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BCP62807 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST2H2BEQ16778 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 KHDC3LQ587J8 217 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 SPATA46Q5T0L3 261 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BHQ93079 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 TECTBQ96PL2 329 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BNQ99877 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 HIST1H2BMQ99879 126 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 REPIN1Q9BWE0 567 aaKnown RBP15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 SHANK1Q9Y566 2161 aa15.58■□□□□ 0.08
PDLIM3-201ENST00000284767 ARR3P36575 388 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 HAAOP46952 286 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 VWA1Q6PCB0 445 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 C9orf106Q8NAJ2 232 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 C3orf80F5H4A9 247 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 ADAM20O43506 726 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 IGHV1-2P23083 117 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 ID3Q02535 119 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 PLP2Q04941 152 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 FOXF2Q12947 444 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 ZNF383Q8NA42 475 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 ACACAQ13085 2346 aa15.57■□□□□ 0.08
PDLIM3-201ENST00000284767 SS18L1O75177 396 aaPredicted RBP15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 DEFA6Q01524 100 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 SRSF7Q16629 238 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 CXorf66Q5JRM2 361 aaPredicted RBP15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 C9orf152Q5JTZ5 239 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 MRPL21Q7Z2W9 205 aaKnown RBP15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 ODF3L1Q8IXM7 274 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 GTF3C1Q12789 2109 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 TGIF2-C20orf24A0A0A6YYL0 155 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 TRAV1-1A0A0B4J248 108 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 PPP1R2P9O14990 202 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 NPBWR2P48146 333 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 CD81P60033 236 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 RPL23AP62750 156 aaKnown RBP15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 OR8G1Q15617 311 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 NMSQ5H8A3 153 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 APOBEC3DQ96AK3 386 aaPredicted RBP15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 MAGT1Q9H0U3 335 aa15.56■□□□□ 0.08
PDLIM3-201ENST00000284767 CYB5BO43169 146 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 TGOLN2O43493 480 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 RD3LP0DJH9 198 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 VDAC1P21796 283 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 NKX6-1P78426 367 aaPredicted RBP15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 HLA-DRB3P79483 266 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 IL24Q13007 206 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 PRDX4Q13162 271 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 SPNS3Q6ZMD2 512 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM214BQ7L5A3 538 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 CMTM1Q8IZ96 169 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 ZADH2Q8N4Q0 377 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 ATP5SQ99766 215 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 URGCP-MRPS24S4R325 110 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 INTS1Q8N201 2190 aaKnown RBP15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM90A10PA6NDY2 464 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM90A18PA6NE21 464 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM90A16PA6NEW6 464 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM90A20PA6NIJ5 464 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM90A8PA6NJQ4 464 aa15.55■□□□□ 0.08
PDLIM3-201ENST00000284767 FAM90A7PA6NKC0 464 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms