RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ZNF35P13682 527 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 IGLL1P15814 213 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 OR10A3P58181 314 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 RAP1AP62834 184 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FABP9Q0Z7S8 132 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FAM120AOSQ5T036 256 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 C11orf71Q6IPW1 123 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 EPGNQ6UW88 154 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 GAPTQ8N292 157 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 LRRC25Q8N386 305 aaPredicted RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 BORCS7Q96B45 105 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 ARHGDIGQ99819 225 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 YIPF3Q9GZM5 350 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 POMKQ9H5K3 350 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 HES4Q9HCC6 221 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 SCRT2Q9NQ03 307 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 MED29Q9NX70 200 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 DENND4AQ7Z401 1863 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 IGKV2D-30A0A075B6S6 120 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 A0A0J9YXY3 114 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FAM25AB3EWG3 89 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FAM25CB3EWG5 89 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FAM25GB3EWG6 89 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 K7N7A8 449 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 TXNDC9O14530 226 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 STK16O75716 305 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 HPNP05981 417 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 AQP1P29972 269 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 HERVK_113P61574 105 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 DAD1P61803 113 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 TMEM267Q0VDI3 215 aaPredicted RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 FHL1Q13642 323 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 HENMT1Q5T8I9 393 aaKnown RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 RUSC1-AS1Q66K80 236 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 STEAP4Q687X5 459 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 SKA2Q8WVK7 121 aaPredicted RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 EXOSC8Q96B26 276 aaKnown RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 AURKBQ96GD4 344 aaPredicted RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 ENOPH1Q9UHY7 261 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 PYGO1Q9Y3Y4 419 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FNDC1Q4ZHG4 1894 aaPredicted RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 A6NDX4 124 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 E7EQ34 232 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 NXPH4O95158 308 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 OR56A5P0C7T3 313 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 TCN2P20062 427 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 EDDM3AQ14507 147 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 IRF4Q15306 451 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 PYCR3Q53H96 274 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 LINC00242Q5T6M2 205 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 Q6ZVH6 145 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 CALHM3Q86XJ0 350 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 PDPNQ86YL7 162 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 Q8N9W7 124 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 OR10X1Q8NGY0 326 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 DNAJC9Q8WXX5 260 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 RPUSD4Q96CM3 377 aaKnown RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 MRPL48Q96GC5 212 aaKnown RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 VPS25Q9BRG1 176 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 CCDC32Q9BV29 185 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 POMPQ9Y244 141 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 SHISA9B4DS77 424 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 APOA2P02652 100 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 S100PP25815 95 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 BTCP35070 178 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 TGFBR2P37173 567 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 FMC1Q96HJ9 113 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 OR4K3Q96R72 315 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 SFXN3Q9BWM7 321 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 ZSCAN16Q9H4T2 348 aaPredicted RBP2.17□□□□□ -2.06
CHD1-201ENST00000284049 NANOGQ9H9S0 305 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 OR52A1Q9UKL2 312 aa2.17□□□□□ -2.06
CHD1-201ENST00000284049 TRAV8-3A0A0A6YYJ7 113 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 C1GALT1C1LP0DN25 315 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 GNB3P16520 340 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 PRSS3P35030 304 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 PHBP35232 272 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 SYNJ2BPP57105 145 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 JOSD1Q15040 202 aaPredicted RBP2.16□□□□□ -2.06
CHD1-201ENST00000284049 RHEBQ15382 184 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 C9orf47Q6ZRZ4 202 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 TMEM25Q86YD3 366 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 SPICQ8N5J4 248 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 ZNF645Q8N7E2 425 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 C2orf15Q8WU43 125 aaKnown RBP2.16□□□□□ -2.06
CHD1-201ENST00000284049 CXorf21Q9HAI6 301 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 ZNF331Q9NQX6 463 aaPredicted RBP2.16□□□□□ -2.06
CHD1-201ENST00000284049 FIS1Q9Y3D6 152 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 PCYT1BQ9Y5K3 369 aaPredicted RBP2.16□□□□□ -2.06
CHD1-201ENST00000284049 COL4A3Q01955 1670 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 SMIM9A6NGZ8 99 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 K7EMT4 169 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 FGF16O43320 207 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 NRASP01111 189 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 HRASP01112 189 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 KRASP01116 189 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 TAS2R43P59537 309 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 HILS1P60008 231 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 LPCAT3Q6P1A2 487 aa2.16□□□□□ -2.06
CHD1-201ENST00000284049 OR2Z1Q8NG97 314 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms