RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 IL36RNQ9UBH0 155 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 CFAP47Q6ZTR5 3102 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 A0A1W2PR80 420 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 CEBPZOSA8MTT3 80 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
SCLT1-201ENST00000281142 PDCD6O75340 191 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 NRASP01111 189 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 PAX5Q02548 391 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 ARL16Q0P5N6 197 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 MALLQ13021 153 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 GAGE1Q13065 139 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 HERPUD1Q15011 391 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 ADIRFQ15847 76 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 SPSB1Q96BD6 273 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 PLA2G3Q9NZ20 509 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 LAMP3Q9UQV4 416 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
SCLT1-201ENST00000281142 GCGP01275 180 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 CELA2AP08217 269 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 Q6ZSR3 168 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 C16orf82Q7Z2V1 217 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 RNF138Q8WVD3 245 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 PIGCQ92535 297 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 HBE1P02100 147 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 CRYABP02511 175 aaKnown RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 LINC00614P0C842 121 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 IAPPP10997 89 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 HIST1H3AP68431 136 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 RPP30P78346 268 aaKnown RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 TIPARPQ7Z3E1 657 aaKnown RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 LRP11Q86VZ4 500 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 OR10A7Q8NGE5 316 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 SPTSSAQ969W0 71 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 HIST1H2AAQ96QV6 131 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 ULBP2Q9BZM5 246 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 SPRY4Q9C004 299 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 MYOTQ9UBF9 498 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 TRBV24-1A0A075B6N3 115 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 XKRY2A2RUG3 117 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 SLC22A20A6NK97 555 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 TK1P04183 234 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 METTL15P1P0C7V9 234 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 TCN2P20062 427 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 CRYGSP22914 178 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 NTF4P34130 210 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 ELLP55199 621 aaPredicted RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 RBM11P57052 281 aaKnown RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 ERVFC1-1P60608 527 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 H3F3AP84243 136 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 C10orf128Q5T292 105 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 NCR3LG1Q68D85 454 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 BTNL3Q6UXE8 466 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 SLC25A26Q70HW3 274 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 OR5L2Q8NGL0 311 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 FGFBP3Q8TAT2 258 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 TMEM54Q969K7 222 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 ZPBPQ9BS86 351 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 RBKSQ9H477 322 aa9.69□□□□□ -0.86
SCLT1-201ENST00000281142 CISD1Q9NZ45 108 aaKnown RBP9.69□□□□□ -0.86
SCLT1-201ENST00000281142 B4DEV8 164 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
SCLT1-201ENST00000281142 ZNF92Q03936 586 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 FOXC1Q12948 553 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 CNN3Q15417 329 aaKnown RBP9.68□□□□□ -0.86
SCLT1-201ENST00000281142 PLCXD3Q63HM9 321 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 Q6ZRM9 215 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 EXTL1Q92935 676 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 SPIN2AQ99865 258 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 SPIN2BQ9BPZ2 258 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 Q9N2K0 584 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 CRIM1Q9NZV1 1036 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 IGKV1-6A0A0C4DH72 117 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 NPIPA2E9PIF3 369 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 NPIPA3F8WFD2 350 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 B4GALT1P15291 398 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 ASCL4Q6XD76 172 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 OR51H1Q8NH63 302 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 TMEM37Q8WXS4 190 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 DIRC2Q96SL1 478 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 SPTBN2O15020 2390 aa9.68□□□□□ -0.86
SCLT1-201ENST00000281142 TMEM210A6NLX4 147 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 SYNGR3O43761 229 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 VDAC1P21796 283 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 MSX1P28360 303 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 OR3A1P47881 315 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 IL24Q13007 206 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 ARSJQ5FYB0 599 aaPredicted RBP9.67□□□□□ -0.86
SCLT1-201ENST00000281142 TMEM164Q5U3C3 297 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 ZNF66Q6ZN08 573 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 HAPLN4Q86UW8 402 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 ZIC4Q8N9L1 334 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 OR1K1Q8NGR3 316 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 GPR146Q96CH1 333 aa9.67□□□□□ -0.86
SCLT1-201ENST00000281142 RPUSD4Q96CM3 377 aaKnown RBP9.67□□□□□ -0.86
SCLT1-201ENST00000281142 ALKBH3Q96Q83 286 aaPredicted RBP9.67□□□□□ -0.86
SCLT1-201ENST00000281142 RASL10BQ96S79 203 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms