RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SELENOHQ8IZQ5 122 aaKnown RBP17.52■□□□□ 0.4
YBX3-202ENST00000279550 LSM5Q9Y4Y9 91 aaKnown RBP17.52■□□□□ 0.4
YBX3-202ENST00000279550 IGKV1D-17A0A075B6S4 117 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 C19orf84I3L1E1 186 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 IFNL4K9M1U5 179 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 SCGB1D2O95969 90 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 MBPP02686 304 aaPredicted RBP17.52■□□□□ 0.39
YBX3-202ENST00000279550 LOXP28300 417 aaPredicted RBP17.52■□□□□ 0.39
YBX3-202ENST00000279550 PRDX2P32119 198 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 CFHR2P36980 270 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 COMMD7Q86VX2 200 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 TMEM56Q96MV1 263 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 AQP10Q96PS8 301 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 SHARPINQ9H0F6 387 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 CYTL1Q9NRR1 136 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 TMEM56-RWDD3S4R434 201 aa17.52■□□□□ 0.39
YBX3-202ENST00000279550 ANKHD1Q8IWZ3 2542 aaKnown RBP17.51■□□□□ 0.39
YBX3-202ENST00000279550 E7EQL1 145 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 F5H0A9 414 aaPredicted RBP17.51■□□□□ 0.39
YBX3-202ENST00000279550 PLAUP00749 431 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 IGLV2-14P01704 120 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 IGFBP2P18065 325 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 GLIPR1P48060 266 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 TPRX1Q8N7U7 411 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 BVESQ8NE79 360 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 OR52M1Q8NGK5 317 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 NEUROG1Q92886 237 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 CXorf58Q96LI9 332 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 DNAJB11Q9UBS4 358 aa17.51■□□□□ 0.39
YBX3-202ENST00000279550 VSTM5A8MXK1 200 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 DEDDO75618 318 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 IGHV1-46P01743 117 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 HEXAP06865 529 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 PET100P0DJ07 73 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 UCP1P25874 307 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 SRPXP78539 464 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 FAM74A1Q5RGS3 127 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 K7EPK0 472 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 HSPA12AO43301 675 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 ZNF737O75373 536 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 RNF224P0DH78 156 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 HKR1P10072 659 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 CEACAM6P40199 344 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 CMTM1Q8IZ96 169 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 FAM71E2Q8N5Q1 922 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 MRGPRDQ8TDS7 321 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 TMEM204Q9BSN7 226 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 DCTN5Q9BTE1 182 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 KCNIP1Q9NZI2 227 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 TMED3Q9Y3Q3 217 aa17.5■□□□□ 0.39
YBX3-202ENST00000279550 SPTBN1Q01082 2364 aaKnown RBP17.49■□□□□ 0.39
YBX3-202ENST00000279550 H0Y980 276 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 LHBP01229 141 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 CD80P33681 288 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 NUP62P37198 522 aaPredicted RBP17.49■□□□□ 0.39
YBX3-202ENST00000279550 GABRA2P47869 451 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 GNMTQ14749 295 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 ESCO2Q56NI9 601 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 KRBOX4Q5JUW0 171 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 FAM201AQ5SY85 155 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 ZNF695Q8IW36 515 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 OR52L2PQ8NGH6 319 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 OR13A1Q8NGR1 328 aa17.49■□□□□ 0.39
YBX3-202ENST00000279550 PLCE1Q9P212 2302 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 MEX3AA1L020 520 aaKnown RBP17.48■□□□□ 0.39
YBX3-202ENST00000279550 CDS2O95674 445 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 HBZP02008 142 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 F2RP25116 425 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 TNFAIP6P98066 277 aaPredicted RBP17.48■□□□□ 0.39
YBX3-202ENST00000279550 FAM90A1Q86YD7 464 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 OR4D5Q8NGN0 318 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 FAM222BQ8WU58 562 aa17.48■□□□□ 0.39
YBX3-202ENST00000279550 CISD1Q9NZ45 108 aaKnown RBP17.48■□□□□ 0.39
YBX3-202ENST00000279550 OOEPA6NGQ2 149 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 OR8U9P0C7N5 309 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 RRASP10301 218 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 APOBEC3AP31941 199 aaPredicted RBP17.47■□□□□ 0.39
YBX3-202ENST00000279550 GATA4P43694 442 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 ZNF672Q499Z4 452 aaPredicted RBP17.47■□□□□ 0.39
YBX3-202ENST00000279550 OR5D13Q8NGL4 314 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 OR8U1Q8NH10 309 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 OR51H1Q8NH63 302 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 ZDHHC8Q9ULC8 765 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 KCNS2Q9ULS6 477 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 PPP1R3CQ9UQK1 317 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 EDDM3AQ14507 147 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 SMCO1Q147U7 214 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 DNTTIP1Q9H147 329 aa17.47■□□□□ 0.39
YBX3-202ENST00000279550 KIAA2026Q5HYC2 2103 aa17.46■□□□□ 0.39
YBX3-202ENST00000279550 ADAM20O43506 726 aa17.46■□□□□ 0.39
YBX3-202ENST00000279550 SSTR5P35346 364 aa17.46■□□□□ 0.39
YBX3-202ENST00000279550 SRSF1Q07955 248 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■□□□□ 10.8
YBX3-202ENST00000279550 TGIF2LYQ8IUE0 185 aa17.46■□□□□ 0.39
YBX3-202ENST00000279550 STOML3Q8TAV4 291 aa17.46■□□□□ 0.39
YBX3-202ENST00000279550 SEBOXQ9HB31 216 aaPredicted RBP17.46■□□□□ 0.39
YBX3-202ENST00000279550 GCM1Q9NP62 436 aa17.46■□□□□ 0.39
YBX3-202ENST00000279550 ARID1AO14497 2285 aa17.46■□□□□ 0.38
YBX3-202ENST00000279550 RPL12P30050 165 aaKnown RBP17.45■□□□□ 0.38
YBX3-202ENST00000279550 IL2RGP31785 369 aa17.45■□□□□ 0.38
YBX3-202ENST00000279550 NMSQ5H8A3 153 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms