RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 C6orf183Q5T699 404 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 C10orf99Q6UWK7 81 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 SLC25A48Q6ZT89 311 aaKnown RBP11.46□□□□□ -0.57
HMGN3-201ENST00000275036 C6orf201Q7Z4U5 140 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 KCNG3Q8TAE7 436 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 FAAP24Q9BTP7 215 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 TAF9BQ9HBM6 251 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.57
HMGN3-201ENST00000275036 SLC17A2O00624 439 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 BPNT1O95861 308 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
HMGN3-201ENST00000275036 TMEM11P17152 192 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
HMGN3-201ENST00000275036 CALRP27797 417 aaKnown RBP11.45□□□□□ -0.58
HMGN3-201ENST00000275036 EBI3Q14213 229 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 HES1Q14469 280 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 GNMTQ14749 295 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 TRAM1Q15629 374 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 Q3ZCU0 254 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 OR5AU1Q8NGC0 362 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 OR52L2PQ8NGH6 319 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 OR6M1Q8NGM8 313 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 RTN4IP1Q8WWV3 396 aaPredicted RBP11.45□□□□□ -0.58
HMGN3-201ENST00000275036 LPAR5Q9H1C0 372 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 ACOT13Q9NPJ3 140 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 GNG12Q9UBI6 72 aa11.45□□□□□ -0.58
HMGN3-201ENST00000275036 SHISA3A0PJX4 238 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 ZNF736B4DX44 427 aaPredicted RBP11.44□□□□□ -0.58
HMGN3-201ENST00000275036 M0QZK8 103 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 PRB2P02812 416 aaPredicted RBP11.44□□□□□ -0.58
HMGN3-201ENST00000275036 ZNF137PP52743 207 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 CLDN12P56749 244 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 CD83Q01151 205 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 EMX1Q04741 257 aaPredicted RBP11.44□□□□□ -0.58
HMGN3-201ENST00000275036 MORN2Q502X0 79 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 C9orf152Q5JTZ5 239 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 KPRPQ5T749 579 aaPredicted RBP11.44□□□□□ -0.58
HMGN3-201ENST00000275036 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 ZNF367Q7RTV3 350 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 IZUMO1Q8IYV9 350 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 Q8N6K4 173 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 EAF1Q96JC9 268 aaPredicted RBP11.44□□□□□ -0.58
HMGN3-201ENST00000275036 NEDD4LQ96PU5 975 aa11.44□□□□□ -0.58
HMGN3-201ENST00000275036 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 FOXI3A8MTJ6 420 aaPredicted RBP11.43□□□□□ -0.58
HMGN3-201ENST00000275036 SOCS1O15524 211 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 ARL6IP5O75915 188 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 NAPSAO96009 420 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 BLVRBP30043 206 aaPredicted RBP11.43□□□□□ -0.58
HMGN3-201ENST00000275036 PPP1CCP36873 323 aaKnown RBP11.43□□□□□ -0.58
HMGN3-201ENST00000275036 PLA2G7Q13093 441 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 HMGN3Q15651 99 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 CENPVQ7Z7K6 275 aaPredicted RBP11.43□□□□□ -0.58
HMGN3-201ENST00000275036 ZNF554Q86TJ5 538 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 OR51D1Q8NGF3 324 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 R3HDM4Q96D70 268 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 PLGRKTQ9HBL7 147 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 RAB9BQ9NP90 201 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 OR2S2Q9NQN1 319 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 BLOC1S6Q9UL45 172 aa11.43□□□□□ -0.58
HMGN3-201ENST00000275036 FGF16O43320 207 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 ARSBP15848 533 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 IL3RAP26951 378 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 TMEM50BP56557 158 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 GABARAPL2P60520 117 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 HTD2P86397 168 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 RAB11BQ15907 218 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 OXLD1Q5BKU9 147 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 ZNF880Q6PDB4 577 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 OR2W3Q7Z3T1 314 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 ODF3L1Q8IXM7 274 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 FAM89BQ8N5H3 189 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-201ENST00000275036 PLSCR3Q9NRY6 295 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 NDUFB11Q9NX14 153 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 KCNIP1Q9NZI2 227 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 JPT1Q9UK76 154 aa11.42□□□□□ -0.58
HMGN3-201ENST00000275036 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 LDLRAD4O15165 306 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 DENRO43583 198 aaKnown RBP11.41□□□□□ -0.58
HMGN3-201ENST00000275036 CD1BP29016 333 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 OR10A3P58181 314 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 C2orf76Q3KRA6 126 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 HES5Q5TA89 166 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 STEAP3Q658P3 488 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 CD200R1LQ6Q8B3 271 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 TGIF2LXQ8IUE1 241 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 FAM3DQ96BQ1 224 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 NOL4LQ96MY1 436 aaPredicted RBP11.41□□□□□ -0.58
HMGN3-201ENST00000275036 ABHD14AQ9BUJ0 271 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 PLEKHJ1Q9NW61 149 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 AK3Q9UIJ7 227 aa11.41□□□□□ -0.58
HMGN3-201ENST00000275036 V9GY05 133 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms