RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 COL7A1Q02388 2944 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 A0A1W2PPI3 338 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 OR4C45A6NMZ5 311 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 NPIPB11E5RHQ5 1161 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 CCRL2O00421 344 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 NXPH3O95157 252 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 GAPDHP04406 335 aaKnown RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 CCDC159P0C7I6 412 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 HOXD3P31249 432 aaPredicted RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 SNRPGP62308 76 aaKnown RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 ZNF816Q0VGE8 651 aaPredicted RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 ALKBH1Q13686 389 aaKnown RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 EBI3Q14213 229 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 ZIK1Q3SY52 487 aaPredicted RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 Q3ZCU0 254 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 C10orf99Q6UWK7 81 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 TGIF2LXQ8IUE1 241 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 STPG2Q8N412 459 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 DHRSXQ8N5I4 330 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 KLHL30-AS1Q8NEE0 82 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 OR8H1Q8NGG4 311 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 CNIH3Q8TBE1 160 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 RFT1Q96AA3 541 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 RAB9BQ9NP90 201 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 LIN7CQ9NUP9 197 aaKnown RBP7.61□□□□□ -1.19
LRTM1-201ENST00000273286 FAM118AQ9NWS6 357 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 KIF25Q9UIL4 384 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 PSG11Q9UQ72 335 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 GMPPBQ9Y5P6 360 aa7.61□□□□□ -1.19
LRTM1-201ENST00000273286 LOC100130705A0A1B0GUX0 176 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 SH2D7A6NKC9 451 aaPredicted RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 J3QLW9 94 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 J3QRE1 110 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 M0QYG6 137 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 HSD17B6O14756 317 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 TXNL1O43396 289 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 FADS2O95864 444 aaKnown RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 CD2P06729 351 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 ZNF19P17023 458 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 RAB3AP20336 220 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 IL3RAP26951 378 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 POLR2IP36954 125 aaKnown RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 ZP1P60852 638 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 GALEQ14376 348 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 PNLIPRP3Q17RR3 467 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 TMEM30BQ3MIR4 351 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 KLHL22Q53GT1 634 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 CXorf66Q5JRM2 361 aaPredicted RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 ZNF691Q5VV52 312 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 IZUMO2Q6UXV1 221 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 RNF144BQ7Z419 303 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 LINC00596Q86U02 117 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 ZNF329Q86UD4 541 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 IZUMO1Q8IYV9 350 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 DRAM1Q8N682 238 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 C8orf31Q8N9H6 132 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 Q8NFD4 153 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 OR51A4Q8NGJ6 313 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 OR52M1Q8NGK5 317 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 OR5M8Q8NGP6 311 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 OR13A1Q8NGR1 328 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 CYGBQ8WWM9 190 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 RNFT2Q96EX2 444 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 PELI1Q96FA3 418 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 C4orf36Q96KX1 117 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 SPACA5Q96QH8 159 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 GPER1Q99527 375 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 CHCHD6Q9BRQ6 235 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 PPIL3Q9H2H8 161 aaKnown RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 Q9H521 79 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 PAK1IP1Q9NWT1 392 aaPredicted RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 DHDHQ9UQ10 334 aa7.6□□□□□ -1.19
LRTM1-201ENST00000273286 EXOGQ9Y2C4 368 aaKnown RBP7.6□□□□□ -1.19
LRTM1-201ENST00000273286 CCL24O00175 119 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 IGKV1D-33P01593 117 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 IGKV1-33P01594 117 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 OR5H8P0DN80 308 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 CAPGP40121 348 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.19
LRTM1-201ENST00000273286 RSU1Q15404 277 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 NHLRC3Q5JS37 347 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 C9orf66Q5T8R8 295 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 RSBN1Q5VWQ0 802 aaPredicted RBP7.59□□□□□ -1.19
LRTM1-201ENST00000273286 OR2T10Q8NGZ9 312 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 OR10AC1Q8NH08 325 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 OR5AK2Q8NH90 309 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 TSEN15Q8WW01 171 aaKnown RBP7.59□□□□□ -1.19
LRTM1-201ENST00000273286 Q96MT0 163 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 NOL4LQ96MY1 436 aaPredicted RBP7.59□□□□□ -1.19
LRTM1-201ENST00000273286 ABCG5Q9H222 651 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 ZNF580Q9UK33 172 aa7.59□□□□□ -1.19
LRTM1-201ENST00000273286 TRAV24A0A0B4J272 114 aa7.58□□□□□ -1.2
LRTM1-201ENST00000273286 IGHV1-3A0A0C4DH29 117 aa7.58□□□□□ -1.2
LRTM1-201ENST00000273286 NCBP2LA6PVI3 153 aaKnown RBP7.58□□□□□ -1.2
LRTM1-201ENST00000273286 HSPB6O14558 160 aa7.58□□□□□ -1.2
LRTM1-201ENST00000273286 ORC5O43913 435 aa7.58□□□□□ -1.2
LRTM1-201ENST00000273286 ZNF780AO75290 641 aaPredicted RBP7.58□□□□□ -1.2
LRTM1-201ENST00000273286 CSTBP04080 98 aaKnown RBP7.58□□□□□ -1.2
LRTM1-201ENST00000273286 CD1BP29016 333 aa7.58□□□□□ -1.2
LRTM1-201ENST00000273286 GNG10P50151 68 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms