RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 IGHEP01854 428 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RPL12P30050 165 aaKnown RBP12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 OR13C8Q8NGS7 320 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SNHG12Q9BXW3 62 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 WNT5BQ9H1J7 359 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 AK3Q9UIJ7 227 aa12.17□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SVEP1Q4LDE5 3571 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NUP210LQ5VU65 1888 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 LOC102725191A0A1B0GVB3 256 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 IFNA21P01568 189 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PIGPP57054 158 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZP4Q12836 540 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 Q5PR19 223 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 C11orf42Q8N5U0 333 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NKAIN3Q8N8D7 197 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ARHGAP32A7KAX9 2087 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 WNT9BO14905 357 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 DLEU1O43261 78 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 GGNQ86UU5 652 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 GPX8Q8TED1 209 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RAB24Q969Q5 203 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RNF122Q9H9V4 155 aa12.16□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CA11O75493 328 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FAM87AP0C7U9 286 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 OR3A1P47881 315 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RAB11AP62491 216 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 C1orf87Q8N0U7 546 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 Q8WTZ3 238 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SAT2Q96F10 170 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF703Q9H7S9 590 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FBXL17Q9UF56 701 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 MTORP42345 2549 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 C20orf202A1L168 122 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 RRP8O43159 456 aaKnown RBP12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 FAM157CP0CG43 387 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 SLC25A4P12235 298 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 PPP1CCP36873 323 aaKnown RBP12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 UCP3P55916 312 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 C19orf12Q9NSK7 152 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
TNFRSF11A-201ENST00000269485 CNN3Q15417 329 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SELENOKQ9Y6D0 94 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 XKRY2A2RUG3 117 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 H3BQ15 152 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 FGF16O43320 207 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CST7O76096 145 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DLK1P80370 383 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 GPR157Q5UAW9 335 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ADPRHL1Q8NDY3 354 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 LAMP3Q9UQV4 416 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CUBNO60494 3623 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OPN1MWP04001 364 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PCBD1P61457 104 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PAX5Q02548 391 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DRAM2Q6UX65 266 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SGPP2Q8IWX5 399 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SPRR3Q9UBC9 169 aa12.14□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CD300LBA8K4G0 201 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR4A8P0C604 315 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 H3F3AP84243 136 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TGFBR3Q03167 851 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 NOL4LQ96MY1 436 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZPBPQ9BS86 351 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PECRQ9BY49 303 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DNAJC4Q9NNZ3 241 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SCTP09683 121 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 LINC00205P59089 165 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 HERPUD1Q15011 391 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 C22orf15Q8WYQ4 148 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 MRI1Q9BV20 369 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SH3BGRL3Q9H299 93 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZFP92A6NM28 416 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 GCH1P30793 250 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TMEM33P57088 247 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 S100A7AQ86SG5 101 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DCTN5Q9BTE1 182 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 RPH3ALQ9UNE2 315 aa12.13□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TRGV8A0A0C4DH27 118 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A0A1W2PNV4 684 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF17P17021 662 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms