RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 LY6EQ16553 131 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 SYS1Q8N2H4 156 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 ZDHHC22Q8N966 263 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 OR2M3Q8NG83 312 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 OR11H7Q8NGC8 314 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 OR6X1Q8NH79 312 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 RTN4IP1Q8WWV3 396 aaPredicted RBP6.83□□□□□ -1.32
USP3-201ENST00000268049 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 WDR34Q96EX3 536 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 PSENENQ9NZ42 101 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 HSPB8Q9UJY1 196 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 CYR61O00622 381 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 COX6A1P12074 109 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 TNXAQ16473 311 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 SAMD13Q5VXD3 122 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 PRSS54Q6PEW0 395 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 DUX5Q96PT3 197 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 ALX4Q9H161 411 aaPredicted RBP6.83□□□□□ -1.32
USP3-201ENST00000268049 ZMAT4Q9H898 229 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 GPR35Q9HC97 309 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 HS3ST3B1Q9Y662 390 aa6.83□□□□□ -1.32
USP3-201ENST00000268049 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 LANCL1O43813 399 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 SPINK4O60575 86 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 TNFSF10P50591 281 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 CNN1P51911 297 aaKnown RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 EGR3Q06889 387 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 COX19Q49B96 90 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 OSR2Q8N2R0 312 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 SLC38A9Q8NBW4 561 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 DDB2Q92466 427 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 SCARF2Q96GP6 870 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 ZNF714Q96N38 554 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 NRTNQ99748 197 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 SSBP3Q9BWW4 388 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 TMEFF2Q9UIK5 374 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 AHCTF1Q8WYP5 2266 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 TTC28Q96AY4 2481 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 PPIAL4CA0A0B4J2A2 164 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 ISLRO14498 428 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 F12P00748 615 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 OR5AC1P0C628 307 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 PPIAL4GP0DN37 164 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 IAPPP10997 89 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 LIMS1P48059 325 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 FHITP49789 147 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 TCTAP57738 103 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 CDK5R1Q15078 307 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 STAC2Q6ZMT1 411 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 OR51E1Q8TCB6 317 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 CNRIP1Q96F85 164 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 DERL3Q96Q80 235 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 MAP1LC3CQ9BXW4 147 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 A0A0G2JLM5 398 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 ZC3H12DA2A288 527 aaKnown RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 TMEM229AB2RXF0 380 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 H3BQ15 152 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 CST7O76096 145 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 GZMHP20718 246 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 CRYBB2P43320 205 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 PAX5Q02548 391 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 TMEM30BQ3MIR4 351 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 SPATA45Q537H7 98 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 Q96M85 177 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 METTL1Q9UBP6 276 aaKnown RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 A0A0B4J293 547 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 ARRDC5A6NEK1 342 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 UPK1AO00322 258 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 PRKNO60260 465 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 NMBP08949 121 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 CA7P43166 264 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 EMDP50402 254 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 PIGPP57054 158 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 FAM3AP98173 230 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 MMDQ15546 238 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 MYPOPQ86VE0 399 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 GPR32P1Q8NGA4 272 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 PRSS3P2Q8NHM4 247 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 SNRNP40Q96DI7 357 aaKnown RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 GPX7Q96SL4 187 aaPredicted RBP6.82□□□□□ -1.32
USP3-201ENST00000268049 GPR84Q9NQS5 396 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 RASL12Q9NYN1 266 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 HSF4Q9ULV5 492 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 R4GMQ9 66 aa6.82□□□□□ -1.32
USP3-201ENST00000268049 MPTX1A8MV57 137 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 ZNF737O75373 536 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 OR2J3O76001 311 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 ZBTB25P24278 435 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 EFNA4P52798 201 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 TIAL1Q01085 375 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP3-201ENST00000268049 OR1L1Q8NH94 360 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 DNAJC4Q9NNZ3 241 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 PARP11Q9NR21 331 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 ZNF256Q9Y2P7 627 aaPredicted RBP6.81□□□□□ -1.32
USP3-201ENST00000268049 V9GYH0 126 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 NKX2-6A6NCS4 301 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 FAM24AA6NFZ4 105 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 COX7A2P2O60397 106 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 FCMRO60667 390 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms