RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 RNF115Q9Y4L5 304 aa14.3□□□□□ -0.12
SQLE-201ENST00000265896 NAPSAO96009 420 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 PAX6P26367 422 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 UCP3P55916 312 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 ADIRFQ15847 76 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 KHDC3LQ587J8 217 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 TRIM61Q5EBN2 209 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 Q6ZSR3 168 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 LFNGQ8NES3 379 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 MRPL30Q8TCC3 161 aaKnown RBP14.29□□□□□ -0.12
SQLE-201ENST00000265896 ATP5SQ99766 215 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 SF3B5Q9BWJ5 86 aaKnown RBP14.29□□□□□ -0.12
SQLE-201ENST00000265896 PRSS50Q9UI38 385 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 CD300LBA8K4G0 201 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 KRASP01116 189 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 IFNA5P01569 189 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 EGR1P18146 543 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 FGF12P61328 243 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 PMP22Q01453 160 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 GAMTQ14353 236 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 IL11RAQ14626 422 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 PRSS8Q16651 343 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 ALKBH6Q3KRA9 238 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 LINC00469Q8N7U9 141 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 CLDN23Q96B33 292 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 ADGRG7Q96K78 797 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 TCFL5Q9UL49 500 aa14.29□□□□□ -0.12
SQLE-201ENST00000265896 HOXA5P20719 270 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 PCBD1P61457 104 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 NKX6-1P78426 367 aaPredicted RBP14.28□□□□□ -0.12
SQLE-201ENST00000265896 NUFIP2Q7Z417 695 aaKnown RBP14.28□□□□□ -0.12
SQLE-201ENST00000265896 M1APQ8TC57 530 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 SCGB1C1Q8TD33 95 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 REPIN1Q9BWE0 567 aaKnown RBP14.28□□□□□ -0.12
SQLE-201ENST00000265896 C1QTNF5Q9BXJ0 243 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 RBKSQ9H477 322 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 SLC25A22Q9H936 323 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 PSENENQ9NZ42 101 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 UCP1P25874 307 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 HLA-DRB3P79483 266 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 ZNF816Q0VGE8 651 aaPredicted RBP14.28□□□□□ -0.12
SQLE-201ENST00000265896 HAPLN4Q86UW8 402 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 PILRBQ9UKJ0 227 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 GRPP07492 148 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 CELA3BP08861 270 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 TAS2R30P59541 319 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 TLE4Q04727 773 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 EIF3IQ13347 325 aaKnown RBP14.28□□□□□ -0.12
SQLE-201ENST00000265896 FIP1L1Q6UN15 594 aaKnown RBP14.28□□□□□ -0.12
SQLE-201ENST00000265896 BTNL3Q6UXE8 466 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 LRP11Q86VZ4 500 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 FAM210BQ96KR6 192 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 ATP23Q9Y6H3 246 aa14.28□□□□□ -0.12
SQLE-201ENST00000265896 TRAPPC2LQ9UL33 140 aa14.27□□□□□ -0.12
SQLE-201ENST00000265896 PPP1R2P9O14990 202 aa14.27□□□□□ -0.13
SQLE-201ENST00000265896 RAMP3O60896 148 aa14.27□□□□□ -0.13
SQLE-201ENST00000265896 RBMXL2O75526 392 aaKnown RBP14.27□□□□□ -0.13
SQLE-201ENST00000265896 IGKV1-5P01602 117 aa14.27□□□□□ -0.13
SQLE-201ENST00000265896 CDX1P47902 265 aaPredicted RBP14.27□□□□□ -0.13
SQLE-201ENST00000265896 FZR1Q9UM11 496 aa14.27□□□□□ -0.13
SQLE-201ENST00000265896 CLDN1O95832 211 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 CLN3Q13286 438 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 CEACAM21Q3KPI0 293 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 FAM90A2PQ658T7 463 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 CT55Q8WUE5 264 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 RCC1LQ96I51 464 aaKnown RBP14.26□□□□□ -0.13
SQLE-201ENST00000265896 MEGF10Q96KG7 1140 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 ELOVL1Q9BW60 279 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 DLL3Q9NYJ7 618 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 DEFB108AA8MXU0 73 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 CDIPTO14735 213 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 DEGS1O15121 323 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 KALRNO60229 2985 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 ABLIM2Q6H8Q1 611 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 OR4C12Q96R67 309 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 CLN8Q9UBY8 286 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 OR2W1Q9Y3N9 320 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 TTC28Q96AY4 2481 aa14.26□□□□□ -0.13
SQLE-201ENST00000265896 IGKV1D-33P01593 117 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 IGKV1-33P01594 117 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 WNT5AP41221 380 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 GNPNAT1Q96EK6 184 aaPredicted RBP14.25□□□□□ -0.13
SQLE-201ENST00000265896 TMEM204Q9BSN7 226 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 DEFB127Q9H1M4 99 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 IL36GQ9NZH8 169 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 KIAA1549Q9HCM3 1950 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 IGHV3-43A0A0B4J1X8 118 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 RNF224P0DH78 156 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 IGHV3-43DP0DP04 118 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 HOXB1P14653 301 aaPredicted RBP14.25□□□□□ -0.13
SQLE-201ENST00000265896 G6PCP35575 357 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 SRPXP78539 464 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 FOXO1Q12778 655 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 ZNF506Q5JVG8 444 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 ZNF826PQ6ZT77 177 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 RFESDQ8TAC1 157 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 TCEAL7Q9BRU2 100 aa14.25□□□□□ -0.13
SQLE-201ENST00000265896 CABLES2Q9BTV7 478 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms