RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 RNF144BQ7Z419 303 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 WFIKKN1Q96NZ8 548 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 GSX2Q9BZM3 304 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 MELTFP08582 738 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 KITLGP21583 273 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 VDAC1P21796 283 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 HPSE2Q8WWQ2 592 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 AKR1E2Q96JD6 320 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 SLC35D1Q9NTN3 355 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 F8W036 122 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 ERHP84090 104 aaKnown RBP12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 SCARB1Q8WTV0 552 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 IL36GQ9NZH8 169 aa12.29□□□□□ -0.44
PDLIM2-201ENST00000265810 ZNF14P17017 642 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 VMA21Q3ZAQ7 101 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 IGFL2Q6UWQ7 119 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 C17orf100A8MU93 164 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 SRSF10O75494 262 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 OPN1MWP04001 364 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 OPN1MW2P0DN77 364 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 OPN1MW3P0DN78 364 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 ELLP55199 621 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 POLR2GP62487 172 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 SPINK9Q5DT21 86 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 BAP18Q8IXM2 172 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 POC1AQ8NBT0 407 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 RELL2Q8NC24 303 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 MRGPRFQ96AM1 343 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 ZNF714Q96N38 554 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 OPN4Q9UHM6 478 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 NCBP2LA6PVI3 153 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 CD74P04233 296 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 IGKV1-12A0A0C4DH73 117 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 IGKV1D-12P01611 117 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 PSG2P11465 335 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 SLC39A9Q9NUM3 307 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 TMEM106BQ9NUM4 274 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 OR1A1Q9P1Q5 309 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 CEP295Q9C0D2 2601 aa12.28□□□□□ -0.44
PDLIM2-201ENST00000265810 GNLYP22749 145 aa12.27□□□□□ -0.44
PDLIM2-201ENST00000265810 REG1BP48304 166 aa12.27□□□□□ -0.44
PDLIM2-201ENST00000265810 ST6GALNAC3Q8NDV1 305 aa12.27□□□□□ -0.44
PDLIM2-201ENST00000265810 OR5T1Q8NG75 326 aa12.27□□□□□ -0.44
PDLIM2-201ENST00000265810 OR4S2Q8NH73 311 aa12.27□□□□□ -0.44
PDLIM2-201ENST00000265810 ACACBO00763 2458 aa12.27□□□□□ -0.44
PDLIM2-201ENST00000265810 FAM209AQ5JX71 171 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 KCNRGQ8N5I3 272 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 ZNF680Q8NEM1 530 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 POM121Q96HA1 1249 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 SOSTQ9BQB4 213 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 IGKV1-27A0A075B6S5 117 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 LILRA1O75019 489 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 F2RP25116 425 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 SPSB4Q96A44 273 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 R3HDM4Q96D70 268 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 NDUFA2O43678 99 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 CEACAM4O75871 244 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 SSTR5P35346 364 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 TMEM182Q6ZP80 229 aaPredicted RBP12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 TGIF2LYQ8IUE0 185 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 OR10Z1Q8NGY1 313 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 MOB3AQ96BX8 217 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 CALYQ9NYX4 217 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 PIPOXQ9P0Z9 390 aa12.27□□□□□ -0.45
PDLIM2-201ENST00000265810 FAM24AA6NFZ4 105 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 CA7P43166 264 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 EXOSC2Q13868 293 aaKnown RBP12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 MED13LQ71F56 2210 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 TNFSF13O75888 250 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 CEACAM3P40198 252 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 TLE4Q04727 773 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 FAM74A1Q5RGS3 127 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 THNSL2Q86YJ6 484 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 HSD17B10Q99714 261 aaKnown RBP12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 CNTNAP3Q9BZ76 1288 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 C5orf66Q9H5L9 145 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 DOCK10Q96BY6 2186 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 MUC1P15941 1255 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 PRSS54Q6PEW0 395 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 LILRB4Q8NHJ6 448 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 ST8SIA2Q92186 375 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 ABHD14AQ9BUJ0 271 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 HEXA-AS1Q9H8Q6 139 aa12.26□□□□□ -0.45
PDLIM2-201ENST00000265810 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
PDLIM2-201ENST00000265810 BCL2L11O43521 198 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms