RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 WDFY1Q8IWB7 410 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 LYPD6BQ8NI32 183 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 ARL2-SNX15V9GYD0 113 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 LOC102725191A0A1B0GVB3 256 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 DHHO43323 396 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 SHHQ15465 462 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 C1orf194Q5T5A4 169 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 PINX1Q96BK5 328 aaKnown RBP14.05□□□□□ -0.16
GPC1-201ENST00000264039 SPOCK3Q9BQ16 436 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 C3orf80F5H4A9 247 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 NPBWR2P48146 333 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 OR1D5P58170 312 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 UNQ5815/PRO19632Q6UWF5 114 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 NUFIP2Q7Z417 695 aaKnown RBP14.04□□□□□ -0.16
GPC1-201ENST00000264039 C7orf61Q8IZ16 206 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 FLVCR1-AS1Q8TAF5 88 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 ST8SIA1Q92185 356 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 FGF14Q92915 247 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 Q96M66 194 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 RAB40CQ96S21 281 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 FGF21Q9NSA1 209 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 PPP1R14DQ9NXH3 145 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 OR6C3Q9NZP0 311 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 PTRH2Q9Y3E5 179 aaKnown RBP14.04□□□□□ -0.16
GPC1-201ENST00000264039 RAB29O14966 203 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 KBTBD11O94819 623 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 TMEM50AO95807 157 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 MRPL54Q6P161 138 aaKnown RBP14.04□□□□□ -0.16
GPC1-201ENST00000264039 VASH2Q86V25 355 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 CRIPAKQ8N1N5 446 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 OR1N1Q8NGS0 311 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 MOB3AQ96BX8 217 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 GPR146Q96CH1 333 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 MTIF3Q9H2K0 278 aaKnown RBP14.04□□□□□ -0.16
GPC1-201ENST00000264039 PLEKHA3Q9HB20 300 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 A0A096LPE4 126 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 A0A1W2PPZ6 126 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 IL3RAP26951 378 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 HOXA6P31267 233 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 CPEB3Q8NE35 698 aaKnown RBP14.04□□□□□ -0.16
GPC1-201ENST00000264039 TMEM170AQ8WVE7 144 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 R3HDM4Q96D70 268 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 UCN2Q96RP3 112 aa14.04□□□□□ -0.16
GPC1-201ENST00000264039 FRMPD3Q5JV73 1810 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 APOA2P02652 100 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 NINJ1Q92982 152 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 CDCA3Q99618 268 aaPredicted RBP14.03□□□□□ -0.16
GPC1-201ENST00000264039 MIEN1Q9BRT3 115 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 BET1LQ9NYM9 111 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 NCOA6Q14686 2063 aaPredicted RBP14.03□□□□□ -0.16
GPC1-201ENST00000264039 POLEQ07864 2286 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 E9PLN8 166 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 SLC17A3O00476 420 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 SERF1AO75920 110 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 C1QTNF9P0C862 333 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 Q56UQ5 140 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 ST6GALNAC6Q969X2 333 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 SLC35E1Q96K37 410 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 OXGR1Q96P68 337 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 ZNF385AQ96PM9 386 aaKnown RBP14.03□□□□□ -0.16
GPC1-201ENST00000264039 MTCH1Q9NZJ7 389 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 USF3Q68DE3 2245 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 TP53I11O14683 189 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 OTX1P32242 354 aaPredicted RBP14.03□□□□□ -0.16
GPC1-201ENST00000264039 ZNF721Q8TF20 911 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 ZNF488Q96MN9 340 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 CLN8Q9UBY8 286 aa14.03□□□□□ -0.16
GPC1-201ENST00000264039 KIR2DS1A0A191URI9 304 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 B4E171 279 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 GALNSP34059 522 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 KIR2DS4P43632 304 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 KIR2DS1Q14954 304 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 CYP2G1PQ6ZSU1 146 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 ZNF573Q86YE8 665 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 FAM19A2Q8N3H0 131 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 CISD2Q8N5K1 135 aaKnown RBP14.02□□□□□ -0.16
GPC1-201ENST00000264039 RHBDD1Q8TEB9 315 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 ANAPC16Q96DE5 110 aa14.02□□□□□ -0.16
GPC1-201ENST00000264039 C1orf147Q96MC9 270 aaPredicted RBP14.02□□□□□ -0.16
GPC1-201ENST00000264039 TRAV38-1A0A0B4J264 116 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 HSBP1O75506 76 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 ACTL6BO94805 426 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 TSPAN7P41732 249 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 PRR31Q5SQ13 230 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 C18orf12Q96KH6 178 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 UHRF2Q96PU4 802 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 SCRT1Q9BWW7 348 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 TMEM106BQ9NUM4 274 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 ZNF732B4DXR9 585 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 ZNF814B7Z6K7 855 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 IGHEP01854 428 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 DCAF10Q5QP82 559 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 GBGT1Q8N5D6 347 aa14.02□□□□□ -0.17
GPC1-201ENST00000264039 ZNF296Q8WUU4 475 aaPredicted RBP14.02□□□□□ -0.17
GPC1-201ENST00000264039 ZNF738Q8NE65 137 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 OR10G8Q8NGN5 311 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 SPSB1Q96BD6 273 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 CACNA1GO43497 2377 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 ABCA7Q8IZY2 2146 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 IGKV1D-13A0A0B4J2D9 117 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms