RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 STRADBQ9C0K7 418 aa13.88□□□□□ -0.19
TM9SF1-201ENST00000261789 ARRDC1-AS1Q9H2J1 176 aa13.88□□□□□ -0.19
TM9SF1-201ENST00000261789 OR51I2Q9H344 312 aa13.88□□□□□ -0.19
TM9SF1-201ENST00000261789 LAMA5O15230 3695 aa13.88□□□□□ -0.19
TM9SF1-201ENST00000261789 TAS2R30P59541 319 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 IL24Q13007 206 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 TESK1Q15569 626 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 PLK3Q9H4B4 646 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 GNG13Q9P2W3 67 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 METTL1Q9UBP6 276 aaKnown RBP13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 WDR1O75083 606 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 CLN5O75503 358 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 S100A9P06702 114 aaKnown RBP13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 CXCL1P09341 107 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 MEOX1P50221 254 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 FGF8P55075 233 aaPredicted RBP13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 ALKBH6Q3KRA9 238 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 FAM53AQ6NSI3 398 aaPredicted RBP13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 Q6P435 159 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 IL22RA2Q969J5 263 aa13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 RIMS4Q9H426 269 aaPredicted RBP13.87□□□□□ -0.19
TM9SF1-201ENST00000261789 LINC00587B1AMM8 73 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 ZNF880Q6PDB4 577 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 LCN15Q6UWW0 184 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 SSX7Q7RTT5 188 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 SEBOXQ9HB31 216 aaPredicted RBP13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 TRAPPC2LQ9UL33 140 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 MPC1Q9Y5U8 109 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 A0A1B0GU03 582 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 ZFP92A6NM28 416 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 YIF1AO95070 293 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 OR2H2O95918 312 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 MMP9P14780 707 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 S100GP29377 79 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 CEBPDP49716 269 aaPredicted RBP13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 ERVFRD-1P60508 538 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 TLE4Q04727 773 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 ATP1A1-AS1Q5TC04 95 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 Q8WTZ3 238 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 SMDT1Q9H4I9 107 aa13.86□□□□□ -0.19
TM9SF1-201ENST00000261789 BTBD17A6NE02 478 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 OR5B21A6NL26 309 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 AP4M1O00189 453 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 S100A8P05109 93 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 SMIM6P0DI80 62 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 CEACAM1P13688 526 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 ZNF585BQ52M93 769 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 HAPLN4Q86UW8 402 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 GTF3AQ92664 365 aaKnown RBP13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 MALSU1Q96EH3 234 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 ZPBPQ9BS86 351 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 ZNF665Q9H7R5 613 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 DOCK11Q5JSL3 2073 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 TRBV6-6A0A0A6YYG2 114 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 TGIF2-C20orf24A0A0A6YYL0 155 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 CDIPTO14735 213 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 IFNA5P01569 189 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 ELOBQ15370 118 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 SCCPDHQ8NBX0 429 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 OR8G5Q8NG78 346 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 CABLES2Q9BTV7 478 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 OR2J1Q9GZK6 312 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 GSN-AS1Q9NRJ2 163 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 PSENENQ9NZ42 101 aa13.85□□□□□ -0.19
TM9SF1-201ENST00000261789 SYNGR2O43760 224 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 HSPB1P04792 205 aaKnown RBP13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 FABP1P07148 127 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 TLE1Q04724 770 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 RNPS1Q15287 305 aaKnown RBP13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 ZNF726P1Q15940 193 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 LINC00596Q86U02 117 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 NIPSNAP3BQ9BS92 247 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 DDA1Q9BW61 102 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 ABI3Q9P2A4 366 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 USF3Q68DE3 2245 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 LNP1A1A4G5 178 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 IFNA17P01571 189 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 SP1P08047 785 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 CEACAM6P40199 344 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 MPLP40238 635 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 RAB11AP62491 216 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 OR2B11Q5JQS5 317 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 RNFT1Q5M7Z0 435 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 RNF150Q9ULK6 438 aa13.84□□□□□ -0.19
TM9SF1-201ENST00000261789 J3QT63 122 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 DFFBO76075 338 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 TFF1P04155 84 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 KIAA0141Q14154 515 aaPredicted RBP13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 OR8G1Q15617 311 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 SPANXN5Q5MJ07 72 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 BCL2L2Q92843 193 aaPredicted RBP13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 RAB40CQ96S21 281 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 UNKLQ9H9P5 680 aaKnown RBP13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 OR14J1Q9UGF5 321 aa13.83□□□□□ -0.2
TM9SF1-201ENST00000261789 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms