RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TMEM41BQ5BJD5 291 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 FAM122BQ7Z309 247 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 OR9G1Q8NH87 305 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 MEGF10Q96KG7 1140 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 AKAP6Q13023 2319 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 BCL2L11O43521 198 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 HPRT1P00492 218 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 S100A8P05109 93 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 SMIM17P0DL12 118 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 IGHV1-2P23083 117 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 TIMP3P35625 211 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 GLRX5Q86SX6 157 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 FAM222BQ8WU58 562 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 IGHV2OR16-5A0A0B4J2B6 119 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 ZNF729A6NN14 1252 aaPredicted RBP11.98□□□□□ -0.49
CDH1-201ENST00000261769 CST4P01036 141 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 FCGR3AP08637 254 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 P2RX3P56373 397 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 FFAR4Q5NUL3 377 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 LINC01590Q5TEZ4 76 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 FDX2Q6P4F2 183 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 BMPERQ8N8U9 685 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 ST8SIA2Q92186 375 aa11.98□□□□□ -0.49
CDH1-201ENST00000261769 RPL27AP46776 148 aaKnown RBP11.97□□□□□ -0.49
CDH1-201ENST00000261769 IL24Q13007 206 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 C1orf100Q5SVJ3 147 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 ZNF66Q6ZN08 573 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 CXorf58Q96LI9 332 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 WASHC3Q9Y3C0 194 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 A0A1W2PPE3 182 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 CDS2O95674 445 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 SSTP61278 116 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 RPL7L1Q6DKI1 246 aaKnown RBP11.97□□□□□ -0.49
CDH1-201ENST00000261769 LILRB1Q8NHL6 650 aaPredicted RBP11.97□□□□□ -0.49
CDH1-201ENST00000261769 SAT2Q96F10 170 aaPredicted RBP11.97□□□□□ -0.49
CDH1-201ENST00000261769 CHEK1O14757 476 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
CDH1-201ENST00000261769 MMD2Q8IY49 270 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 DLL3Q9NYJ7 618 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 J3QR06 171 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 ZNHIT1O43257 154 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 RAB32Q13637 225 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 SCMH1Q96GD3 660 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 CLEC7AQ9BXN2 247 aa11.97□□□□□ -0.49
CDH1-201ENST00000261769 C20orf202A1L168 122 aa11.96□□□□□ -0.49
CDH1-201ENST00000261769 ORM2P19652 201 aa11.96□□□□□ -0.49
CDH1-201ENST00000261769 SPINK9Q5DT21 86 aa11.96□□□□□ -0.49
CDH1-201ENST00000261769 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
CDH1-201ENST00000261769 RFLNBQ8N5W9 214 aa11.96□□□□□ -0.49
CDH1-201ENST00000261769 MITD1Q8WV92 249 aa11.96□□□□□ -0.49
CDH1-201ENST00000261769 RPUSD4Q96CM3 377 aaKnown RBP11.96□□□□□ -0.49
CDH1-201ENST00000261769 SIRT4Q9Y6E7 314 aaPredicted RBP11.96□□□□□ -0.49
CDH1-201ENST00000261769 A0A1B0GU03 582 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 PRSS54Q6PEW0 395 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 CALHM1Q8IU99 346 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 PARP11Q9NR21 331 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 CHD5Q8TDI0 1954 aa11.96□□□□□ -0.5
CDH1-201ENST00000261769 PAX6P26367 422 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 GZMKP49863 264 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 PLA2G2CQ5R387 149 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 NCR3LG1Q68D85 454 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 CLEC18BQ6UXF7 455 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 BDP1A6H8Y1 2624 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 DYRK2Q92630 601 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 MRGPRFQ96AM1 343 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 LPAR5Q9H1C0 372 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 HSF4Q9ULV5 492 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 SPP1P10451 314 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 PF4V1P10720 104 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 NPY1RP25929 384 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 USF2Q15853 346 aaPredicted RBP11.95□□□□□ -0.5
CDH1-201ENST00000261769 FOXB2Q5VYV0 432 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 ABHD12Q8N2K0 398 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 BVESQ8NE79 360 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 OR5P3Q8WZ94 311 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 TUBD1Q9UJT1 453 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 ABCA4P78363 2273 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.95□□□□□ -0.5
CDH1-201ENST00000261769 NKX2-6A6NCS4 301 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 POLR2GP62487 172 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDH1-201ENST00000261769 SIRT7Q9NRC8 400 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
CDH1-201ENST00000261769 DIDO1Q9BTC0 2240 aaKnown RBP11.94□□□□□ -0.5
CDH1-201ENST00000261769 ZNF705FA8MVS1 300 aaPredicted RBP11.94□□□□□ -0.5
CDH1-201ENST00000261769 ZNF705DP0CH99 300 aaPredicted RBP11.94□□□□□ -0.5
CDH1-201ENST00000261769 ZNF705BP0CI00 300 aaPredicted RBP11.94□□□□□ -0.5
CDH1-201ENST00000261769 Q6ZS92 163 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms