RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PLCXD1Q9NUJ7 323 aa14.95□□□□□ -0.02
TM6SF1-201ENST00000258909 SC5DO75845 299 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 MYCNOSP40205 109 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 EGFEM1PQ0D2K5 195 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 PNLIPRP3Q17RR3 467 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 Q3ZCU0 254 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 NKAPLQ5M9Q1 402 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 FAM27D1Q5T7N8 215 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 OR10K2Q6IF99 312 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 TEX38Q6PEX7 206 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 FBLIM1Q8WUP2 373 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 P2RX4Q99571 388 aa14.94□□□□□ -0.02
TM6SF1-201ENST00000258909 FAM90A10PA6NDY2 464 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 FAM90A7PA6NKC0 464 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 FAM90A23PA8MXZ1 464 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 CD1AP06126 327 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 ZNF137PP52743 207 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 GP2P55259 537 aaKnown RBP14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 RAB25P57735 213 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 GPR50Q13585 617 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 DEFB136Q30KP8 78 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 OGFRL1Q5TC84 451 aaPredicted RBP14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 NKAIN3Q8N8D7 197 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 MRPL30Q8TCC3 161 aaKnown RBP14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 DPF1Q92782 380 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 RAX2Q96IS3 184 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 RAB9BQ9NP90 201 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 ERGIC3Q9Y282 383 aa14.93□□□□□ -0.02
TM6SF1-201ENST00000258909 TXNL1O43396 289 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 PDCD6O75340 191 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 SLC2A2P11168 524 aaPredicted RBP14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 PPP1CCP36873 323 aaKnown RBP14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 MORN2Q502X0 79 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 ACSM3Q53FZ2 586 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 TRAT1Q6PIZ9 186 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 FAM71E2Q8N5Q1 922 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 UQCC2Q9BRT2 126 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 MBNL3Q9NUK0 354 aaKnown RBP14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 FKBP14Q9NWM8 211 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 KCNIP1Q9NZI2 227 aa14.92□□□□□ -0.02
TM6SF1-201ENST00000258909 ANKRD65E5RJM6 399 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 CA11O75493 328 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 MYF6P23409 242 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 MAPK3P27361 379 aaPredicted RBP14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 SOX6P35712 828 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 GABPB1Q06547 395 aaPredicted RBP14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 TMEM30BQ3MIR4 351 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 SULT4A1Q9BR01 284 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 TMED9Q9BVK6 235 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 KCNK15Q9H427 330 aa14.91□□□□□ -0.02
TM6SF1-201ENST00000258909 PTGES3LE9PB15 166 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 CCL24O00175 119 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 CASQ2O14958 399 aaPredicted RBP14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 GLAP06280 429 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 SLC6A1P30531 599 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 LSAMPQ13449 338 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 CXorf66Q5JRM2 361 aaPredicted RBP14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 C11orf87Q6NUJ2 197 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 OR8H1Q8NGG4 311 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 RITA1Q96K30 269 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 FAAP24Q9BTP7 215 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 ABHD14AQ9BUJ0 271 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 GON7Q9BXV9 100 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 GPR61Q9BZJ8 451 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 CST11Q9H112 138 aa14.9□□□□□ -0.02
TM6SF1-201ENST00000258909 LANCL1O43813 399 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 RRP9O43818 475 aaKnown RBP14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 CDK1P06493 297 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 VSIG8P0DPA2 414 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 RBM48Q5RL73 367 aaKnown RBP14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 STEAP3Q658P3 488 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 UNQ9370/PRO34162Q6UXP9 181 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 LRRTM1Q86UE6 522 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 ODF3L1Q8IXM7 274 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 MCRIP2Q9BUT9 160 aaKnown RBP14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 MRPL20Q9BYC9 149 aaKnown RBP14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 GHRLQ9UBU3 117 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 H0YHG0 523 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 VDAC1P21796 283 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 CNTFRP26992 372 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 CHATP28329 748 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 OR3A3P47888 321 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 CFHR3Q02985 330 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 FOXE3Q13461 319 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 MMDQ15546 238 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 C6orf141Q5SZD1 244 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 C6orf201Q7Z4U5 140 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 THRSPQ92748 146 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 NEDD4LQ96PU5 975 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 NICN1Q9BSH3 213 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 MND1Q9BWT6 205 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 ZNF107Q9UII5 783 aaPredicted RBP14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 JPT1Q9UK76 154 aa14.89□□□□□ -0.03
TM6SF1-201ENST00000258909 NBEAL2Q6ZNJ1 2754 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 ELANEP08246 267 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 HTR2CP28335 458 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 RPS27AP62979 156 aaKnown RBP14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 GLT8D1Q68CQ7 371 aa14.88□□□□□ -0.03
TM6SF1-201ENST00000258909 CEACAM19Q7Z692 300 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms